Gene Francci3_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1887 
Symbol 
ID3906836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2218680 
End bp2219261 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID637879225 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_480992 
Protein GI86740592 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.579337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC AGCCCACCAA CCTCGCGGTA GTTATTGGAA GCAACAGGGT AGGACGTTTC 
GCCCCGGTGG TCGCCCAGTG GTTCATCAAG CAGGTATCCG CCCACGATTC GATCGTCACG
AGCGTCGTCG ATCTCGATGA CGTCAGGCTG CCGGAGAGGC TGGGTACCTC CAGCGGTCCA
GAAGTCGCGG AGCTAGCGGA CGTCACCCGG CAGCTTGCCG CGGCCGACGC CTTCGTCGTG
ATCACCCCCG AGTACAACCA CAGTTACCCG GCCGTTCTCA AGAATGTCAT CGACTGGCAT
TACACCGAGT GGCAGGCGAA GCCGGTGGGT TTCGTTTCCT ACGGCGGCCA GGCGGGCGGC
CTGCGCGCGG TGGAGCACCT GCGCCAGGTT TTCGCCGAGC TGCACGCGGT CACCATCCGC
GATACGGTCA GCTTCCACGG TGCCTGGGAC CGGTTCCACG CCGATGGCAC GCCCAAGGAT
CCCGAAGGCT GCAACACCGC TGCCCAGACC CTGATCAGGC AACTCGAGTG GTGGGCGGTC
GCGCTCGCGG AGGCCAGGGA GAAGCGTCCC TACACGGTGT GA
 
Protein sequence
MLDQPTNLAV VIGSNRVGRF APVVAQWFIK QVSAHDSIVT SVVDLDDVRL PERLGTSSGP 
EVAELADVTR QLAAADAFVV ITPEYNHSYP AVLKNVIDWH YTEWQAKPVG FVSYGGQAGG
LRAVEHLRQV FAELHAVTIR DTVSFHGAWD RFHADGTPKD PEGCNTAAQT LIRQLEWWAV
ALAEAREKRP YTV