| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1870 |
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| Symbol | |
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| ID | 3906145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2204950 |
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| End bp | 2206461 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879208 |
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| Product | phage integrase-like SAM-like |
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| Protein accession | YP_480975 |
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| Protein GI | 86740575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.254784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGTGG TTCGGCGCCG TGTCGTGGTT CTACCGTCGA CTCCCATGTT GCTGATCTTC
TTCTCGTCAC GGGGGTGGGA GTCGTGGGAT GTCGAGGCAG CGCCGCTGAT CCCCGAGCGC
ATGCCGGTGC TGGTCGACGA CGATCTGCGG TTCGAGGACG GGCCGGGGTG CGTGCGGCCG
GCGGCGGTGG TGAACCGGTG GCTTCGTGAG CTTCCGGCGT GCGGTGTGCC GGCGCCGCGG
TCGTGGGCGG CGTATGCGCG GGCGGTGAAG GACTGGGTGG AGTTCCTGGC CGGGCACGGC
ATCGACGTGC TCGGCCCGCG CGAGCAGCTC AAACTGGCAC TTGGGAAATA TGCCGAGGAC
CGGTCGGCGG GGCCGGTGGA GCGGCGGCTG GCGGCGAGCA CGTGGAGCCA GCACATAAGC
ATCGTGAGCA TGTTCTACCG GTGGGCGATG GCCGAAGGCT ATGCGTCGGC CGAGCCGTTC
ACCTACCGGA CCGCGAAGGC CATGGTCGGC GGCATGGTGC GTGACGTCCG GGTGAACCTG
GCGATGCGCC GAACTCCGAA ACCGCACGTC ACGATCAAAT ATCTGGAAGC CGACTTTGCG
ACGTTGCTGC TGAACGCGCT GGCCGGGCTG GACCGGGACG GTCAGGCGGA TGCTGGCTAT
GCGGGGCGGG AGCTTGCCCG TAACCGGGCG GTGGTCGGGT TGGCGTTGGC GACGGGCCTG
CGGTTGCAGG AGTTCTCGTC GCTGCTGGTC TATGAGATCC CGACGCCGCC GTCCCGGCCG
GGGGCGCTGC CGGTGCCGTC CGGGGTGGCC AAGGGCCGTA AGTTCCGTAC CAGTTGGATC
AGCGTCGAGG CGCTGAGGGT TGTGCATGAT TATGTGACGC TGGACCGGGC CGCCGCGGTG
GAAGGAGCAT CATGGTGTCC GCCGGCCCGG TGGGGTCCTG CGCTGCGGGT GAGCGAGCCG
GACATGCGTG GCGGGCGGAT TAACGGGGTG CGCCGGGACT GGGATGCGCT GACGCCGGGC
GAGCGGCGGC GGCTGGTCGC TCCGGATGGT GGTTCGTGCC TGTTGGCGGT CCGCTCGGAC
GGCGGACCGT TCACCGCCTG GGCGACCGTT TTGGAACGCG CGTCGGATCG TATCCGGGCA
CGTGTCGAGC TGCGGTTCCC GCATGTTCAT CCGCATCGGC TGCGGCATTC TTTCGCGATG
GCCACGTTGG AACGGCTGGT GGATGGGCAT TACCGGCGGG CCGCCGAACT GGTGGCGGCC
GGTGGAGACG GCGGGCCGGA CGCCGCGTTG GCGTTGTATC TGAGCAAAGC CGATCCGCTG
CTGGTGCTGC GGGATTTGAT GGGTCACTCA TCGGTCACCA CGACGGAGGC TTACCTTCGC
CGGTTGGACA CCACCCGGAT TTTCGGGGAG GCGTATGCGC GAGCCGGCGC GGCGGCCGGC
CTGGCCGATG ATCCGGCGGC GGACACCGAG GTCGCGGCGG AGTTCACCGA CGAACCTGGC
GAGGACGACT GA
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| Protein sequence | MVVVRRRVVV LPSTPMLLIF FSSRGWESWD VEAAPLIPER MPVLVDDDLR FEDGPGCVRP
AAVVNRWLRE LPACGVPAPR SWAAYARAVK DWVEFLAGHG IDVLGPREQL KLALGKYAED
RSAGPVERRL AASTWSQHIS IVSMFYRWAM AEGYASAEPF TYRTAKAMVG GMVRDVRVNL
AMRRTPKPHV TIKYLEADFA TLLLNALAGL DRDGQADAGY AGRELARNRA VVGLALATGL
RLQEFSSLLV YEIPTPPSRP GALPVPSGVA KGRKFRTSWI SVEALRVVHD YVTLDRAAAV
EGASWCPPAR WGPALRVSEP DMRGGRINGV RRDWDALTPG ERRRLVAPDG GSCLLAVRSD
GGPFTAWATV LERASDRIRA RVELRFPHVH PHRLRHSFAM ATLERLVDGH YRRAAELVAA
GGDGGPDAAL ALYLSKADPL LVLRDLMGHS SVTTTEAYLR RLDTTRIFGE AYARAGAAAG
LADDPAADTE VAAEFTDEPG EDD
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