Gene Francci3_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1854 
Symbol 
ID3906129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2187141 
End bp2188004 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID637879192 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_480959 
Protein GI86740559 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.794168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTGGT TCATGACCGG AAGCATTGAG GAGTTTCTCG CGGTGGCGGG CGAGTTTCTG 
ATGTCCCAGC TGGCCGAGAA CACCGTGTTG GTCACCGTCG CCGAGACGCT CCAAGCGCGT
GGCATGGCGG CATTCGGGGA TGCGGCTCCC CTGTTCGGTT GGTGGCTGGA GGCTGGCGGA
CCCATCGAGA GCGCATTCGT GCATACCCCA CCGAATCCCG TCCTTCTGAC GACCGTTCCG
CCGCGGGCAG TCGAGTCGCT GGTCGCGTCC TGGCCGCGCG GAAGGCCGCT GTCCGGGGTA
AATGCGCCAG CGCAGGTGGC CAGCGCATTT GCCTCGTCCT GGCACCAGGG GACAGCTGCC
GCGCCATCTC TTCATCGCCG GGAGCGTTTG TATCGGCTCG GAGACCTCGC AGCGCCCCAG
CCAAAGCCCG CAGGTCGTCC TCGTGCGGCC GAGGCAACCG ACAAGGACCT GCTCGTGGCC
TGGGTCACGG CGTTCCAAGA AGAGACCGGT GCGGCCGCCG GCAACGCCCC GAGGCGGGTC
GATGACCGTC TCAGCTATGG CGGCTTCACC CTGTGGGAGG TCGACGGTGC GCCGGTGTCG
GTGGCCGGAA TTACCCGGCC GGTAGGCGGG ATGATCCGCA TCGGGCCGGT ATATACCCCG
CCGGGCTTCT GGCGAAGAGG CTACGCCGGG GCGGTGACAG CGGCGGTGAG CCAGACCGCG
CTGGAAGCGG GAGCGCGCGA GGTCCTGTTG TTCACCGATC TGGCCAATCC GACCAGCAAC
AGCGTGTATC AGCGGCTCGG CTTCGAACCT GTCGAAGACC GCGTCGTGCT GCTGTACGAG
CGCACGCCCA CGCCTTCGAT CTGA
 
Protein sequence
MAWFMTGSIE EFLAVAGEFL MSQLAENTVL VTVAETLQAR GMAAFGDAAP LFGWWLEAGG 
PIESAFVHTP PNPVLLTTVP PRAVESLVAS WPRGRPLSGV NAPAQVASAF ASSWHQGTAA
APSLHRRERL YRLGDLAAPQ PKPAGRPRAA EATDKDLLVA WVTAFQEETG AAAGNAPRRV
DDRLSYGGFT LWEVDGAPVS VAGITRPVGG MIRIGPVYTP PGFWRRGYAG AVTAAVSQTA
LEAGAREVLL FTDLANPTSN SVYQRLGFEP VEDRVVLLYE RTPTPSI