Gene Francci3_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1841 
Symbol 
ID3906232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2177077 
End bp2178006 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID637879179 
Producthypothetical protein 
Protein accessionYP_480946 
Protein GI86740546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.447745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG CGAAACCGGC GACGACGCCT GCTGGCCAGG TCGCGGAGGC GGTGCGGGCC 
GTCCTCGCCG GAGAGGCTCT CCCCGAGGTC GCCGCCCGAA CCGGTCTGTC GGCCGTGGAT
CTGCAAGCCG CCCTCGCGAC TTACCACGCA GGCGGCAAAA GGGCGGTCGA GGCGCGATCC
GCGGGCCGCT GGTACACCGT CCGCGTCGTC TTCGGCGACC GGACGCAGGC CGAGACGACG
ATGTCGACCA TCGTGGCCCC GGTGCTCGAC ACGCTGTGCG CGAGTCGTCG GTCGGTCGGG
TGGTGGTTTC GGCGGGAGCC TCGTGCCTGG CGGATCTACC TGCATAATCC CGACCTCGCC
GCCGCTGGCC AGGCGATCCG TCGGCTGGGA CGAACCGGAA CTGTCGCCGC GACCGTTCCG
GAGCCCTACG AACTGGACCC GCAGCCCTTC GGCGGACTTA CCGGCGCCGC CATCGCCCAG
GATCTCTTCG TCGTTGAGAG CCGAGCCGTC CTCGGCTACG CCCGCCTGGC CGATCCGCCG
CTCGGCCGCC GCGAGCTGTC CGTCGCCGTC CTGGACACCC TGATGATCGC CGCCGGACTC
GCCTGGCCCG CCCGCGGCGA CGTCTACACC CGCCTCGCCG CGACCCATCC CAACGTCGAC
CCGACCGGCG CGCGCCGCCT CGGCGCGGAA CTGCTCGCAT CCCTGACCGA CCCAGCCTCC
GACCTGGCAT TTGCGTCCGC CGCAGCGTGG ACGGACGGCT GCGCCGACGC AGGCGAACGG
CTCGCCGACG CCGCCGACAA CAACCTGCTG ACCCGCGGAC TCGTTGATGT CCTGGCCACC
ATCGTCAACG CCCACTGGAA CCGTCTCGGG GTGCCCGCAG CCACCCGGGC CGCATTCGCC
CACGCGGTGA CGCACCTCTA CTCTCCTTAG
 
Protein sequence
MTTAKPATTP AGQVAEAVRA VLAGEALPEV AARTGLSAVD LQAALATYHA GGKRAVEARS 
AGRWYTVRVV FGDRTQAETT MSTIVAPVLD TLCASRRSVG WWFRREPRAW RIYLHNPDLA
AAGQAIRRLG RTGTVAATVP EPYELDPQPF GGLTGAAIAQ DLFVVESRAV LGYARLADPP
LGRRELSVAV LDTLMIAAGL AWPARGDVYT RLAATHPNVD PTGARRLGAE LLASLTDPAS
DLAFASAAAW TDGCADAGER LADAADNNLL TRGLVDVLAT IVNAHWNRLG VPAATRAAFA
HAVTHLYSP