Gene Francci3_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1838 
Symbol 
ID3906229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2174457 
End bp2175245 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID637879176 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_480943 
Protein GI86740543 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.999311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG ACGTCCACGA CGCCAAACAG CAGGTCCGCG ACCGGATCTG GGCCCTTCTG 
GAAGGCGAAC AGGCCGCGCC ACCGGGCGTC CATGGGTATA TCCCCGCGTT CACCGGCGCC
GAGGTCGCCG CCACGCGGCT GGCCGCCCTA CCCGCGTGGA CCTCGGCGCA CGTCGTGAAG
GCTGTGCCCG ATCGGGCGCA GCAACCCGTC CGCGCCCACG CGCTGCGCGA CGGCAAGACC
GTCTACATGG CCGTGCCCAG ACTGGCCGAG CCGCTGCCGT TCTACCGTCT CGACCCCGCC
GTGCTGCCCC TGCCTCCCGA GCAGGCCGCC GACCGGCACG TCGCCGCCAC CATCGCCGAC
CCGGTCGGCG TGGACGACAT GGACCCCGTC GACATCGTCG TGTGCGGCAG CGTCGCGGTC
AACCGAGCCG GCGTTCGGCT CGGGAAAGGC GCCGGCTACT CCGACCTCGA ATTCGCGCTT
CTCCAGGAAG CCGGGCTCAT CCAGTCCACC ACCATCATCG TCACCACGGT CCATGACCTT
CAGGTCGTCG ATGACGACCT CCCGGAAACC CGCCACGATT TCAGCGTCGA CCTCATCGTC
ACCCCCACCC GCACCATCAC CTGCGGGCCA CCCCACCGCC CGGAGGGCCT CTACTGGCAG
GATCTCGACG ACGTCACCGT CAGCACGATC CCCGTCCTCG CCGCCCGACG AGCGGCCTGG
CTGCGGTTCC CGGGGACTCC TACAGCGCCC GAGAACAATC AACCTCGTCG CCGCGCCGAC
GAACACTGA
 
Protein sequence
MNRDVHDAKQ QVRDRIWALL EGEQAAPPGV HGYIPAFTGA EVAATRLAAL PAWTSAHVVK 
AVPDRAQQPV RAHALRDGKT VYMAVPRLAE PLPFYRLDPA VLPLPPEQAA DRHVAATIAD
PVGVDDMDPV DIVVCGSVAV NRAGVRLGKG AGYSDLEFAL LQEAGLIQST TIIVTTVHDL
QVVDDDLPET RHDFSVDLIV TPTRTITCGP PHRPEGLYWQ DLDDVTVSTI PVLAARRAAW
LRFPGTPTAP ENNQPRRRAD EH