Gene Francci3_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1811 
Symbol 
ID3906202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2147906 
End bp2148343 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content62% 
IMG OID637879149 
ProductNUDIX hydrolase 
Protein accessionYP_480916 
Protein GI86740516 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTACC GCAGCGTCAT CGACGTCATG CTCCTGCTCA TCCGCGATGA TGCGGTCCTG 
CTCGCGTTGC GATCCGGCAC GGGATTCGCC GACGGCTGGT GGAACGTCCC GTCAGGAAAA
CTCGAAGATG GTGAGGACGC CGCTTCCGCG CTATGCCGCG AGAGCCGTGA AGAAATTGGC
CTTCATCTCG ATCCCGCCTC GCTTACTCTC GCTTCGACGG TCCACTTCCG GAACGAGCGC
GGGGAAGCGC GCCTTGGCCT GTTCTTTCAG CCGGAGTGCT GGCACGGAGA ACCCGTCAAC
GCGGAACCCC AAAAGTGTGC CCGGATCGCC TGGTTTCCCC TCGACGAGAT TCCCGACAGC
ACGTATCCAT ACACCCGTGT CGGCATCGAT CTCCACAGGC GGCGGGAGAA CTTTGCCATC
TCCGGGTGGG AGACATAG
 
Protein sequence
MGYRSVIDVM LLLIRDDAVL LALRSGTGFA DGWWNVPSGK LEDGEDAASA LCRESREEIG 
LHLDPASLTL ASTVHFRNER GEARLGLFFQ PECWHGEPVN AEPQKCARIA WFPLDEIPDS
TYPYTRVGID LHRRRENFAI SGWET