| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1809 |
|---|
| Symbol | |
|---|
| ID | 3906200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2144583 |
|---|
| End bp | 2145674 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879147 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480914 |
|---|
| Protein GI | 86740514 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA CCATCGACTC CATTTTCATA CCGACCGAGC TGACAGCCGG TCATGCACCG
CTCTGGACCG GTCGGGAGCT GCATCCCGAT GCCTATCTCC AGCGGATCGA CGATGCGCAC
CGCGCCGACC TGGCCGCGGC GGTGCGCGCG GCGAGTGCCC GGTTGGCATC CCGAGACCTG
TTCCACGACC GTGACCTCAC AGACCAGGAC GTTCTCCTGC CGCACCTGGA CGCGCCGCTC
GCCGCGCTCG CCACGGCGGT CGCCGTGGGA CACGGCTTCG CCGTACTCCG GGGCTTACCT
GTGGAGGATC TCGACGACCG CGAGTGCCTC GTGCTGATCC GCGGCATCGC GGCCCGGCTG
GGACGGATCG CGACCCAGAG CCGCGACGGG CAGCTTGTCC GTCGCGTTCG GGCGAGTGGC
CGGCAGCTCG GTGACGGCCG GGTACGGGGA CACCAAACCG CGGAACGGTT GTGGTTTCAC
ACTGACGGCG CCGACGCGAC GCTGCTGCTG TGCCGGCGCC CCGCGGACCG GGGTGGGATG
AGCCGCGTGG CGTCCGCCGC GGCGGTGCAC AACGCGATGC TCGCGAGCGC GCCGAACCTC
GTCGCCGAGC TCTACCAGCC GTTTCACTTC CACATGGCCG GCGGGAACAT CCCCGGCGGC
CCACCGACGT TCCTCTCGCC GATCTTCTGC GCGTACCGCG GGCTTTTCAG TGTCCGCTTC
GTGCGGCACA CGCTCCTGGA GACGCAGACG GTCACCGGTG TGCCGCTGTC CCCGACAGCT
CTCGCGGCGT TTGACCTCCT CGACGAGGTC GCCGACCAGC TGGCCTGCGA CATGGAACTT
CGGCCCGGTG ATCTCCAGAT CGTCCACAAC CACTGTGTTC TGCATTCCCG CACGGCCTAC
ACCGACGCGC CCGACCCCCG GCAGGCCCGC CACCTGCTGC GCTGCTGGAT CACCCTGCCG
GCCCCCGACC GCCGGCCCGG TGCCGTCGAG CAGGGCCTGC GAGGCGGATG GCTCACGGAC
GATCTACAGC AGGCTGCCGC CTCCACCTGG ACACCTCCCA CCGCCGCCGG TCTTGCGGAC
GGCCCCACGT GA
|
|---|
| Protein sequence | MAETIDSIFI PTELTAGHAP LWTGRELHPD AYLQRIDDAH RADLAAAVRA ASARLASRDL
FHDRDLTDQD VLLPHLDAPL AALATAVAVG HGFAVLRGLP VEDLDDRECL VLIRGIAARL
GRIATQSRDG QLVRRVRASG RQLGDGRVRG HQTAERLWFH TDGADATLLL CRRPADRGGM
SRVASAAAVH NAMLASAPNL VAELYQPFHF HMAGGNIPGG PPTFLSPIFC AYRGLFSVRF
VRHTLLETQT VTGVPLSPTA LAAFDLLDEV ADQLACDMEL RPGDLQIVHN HCVLHSRTAY
TDAPDPRQAR HLLRCWITLP APDRRPGAVE QGLRGGWLTD DLQQAAASTW TPPTAAGLAD
GPT
|
|---|
| |