Gene Francci3_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1762 
Symbol 
ID3906828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2094244 
End bp2094717 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID637879100 
Productrubrerythrin 
Protein accessionYP_480867 
Protein GI86740467 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.224353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGACCGGAGA ACCGGTTGAC GAGCAGGCCC GAGGTTTCTT GTTCGCTGAT 
CTGCGGGCGG CGTTCGCCAG TGAGGCGACG GCGGTGCAGC GCTATACCTA TTTCGCCCAG
GTGGCCGAGA TCGAGGGCCA CATGGAGGTG GCGAGGCTAT TCACTGAGAT GGCCGAGAGC
GTAGCCTGTG TCGCCCACGG ACACATCGAC TTCCTTCAGC AGGTCGGTGA TCCGAGCACT
GAGATGCCGA TGGGTGATAC TCCGCTCAAC CTTGCGGCCG CAGTCGCGGG CGCGGCCGAG
GCGGCCACCA AGCACTATCC TCGGCTAGTT GCGCTGGCGC ACACCGAGGG GATAGCCGAC
GCGGCGAGTT GGCTGACCAC GTTGTGCGCG CTGAAGAACG CACATGTGCA GCGTCTGGGG
GCCGCACTGT CCGAGTTGAC CGGTCGGGCC GCCGCGCCTG CCGAGGCCGG ATGA
 
Protein sequence
MSEPTGEPVD EQARGFLFAD LRAAFASEAT AVQRYTYFAQ VAEIEGHMEV ARLFTEMAES 
VACVAHGHID FLQQVGDPST EMPMGDTPLN LAAAVAGAAE AATKHYPRLV ALAHTEGIAD
AASWLTTLCA LKNAHVQRLG AALSELTGRA AAPAEAG