| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1759 |
|---|
| Symbol | |
|---|
| ID | 3906825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2089953 |
|---|
| End bp | 2090915 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637879097 |
|---|
| Product | amidinotransferase |
|---|
| Protein accession | YP_480864 |
|---|
| Protein GI | 86740464 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1834] N-Dimethylarginine dimethylaminohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.414025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.244566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCC AGACACCTGG ATCTGAAAGG CTGCCGAGCA CACTCGCAGG CCCCGGTTGG
CATGCTCGGG TAGCCTCGCA CGGCGCCGAG GTCGCTGAGG GGCGACTTTG GACCCGCTGT
GGCTACCGAT CCGAATACGC CAGGCTGCGG CGGGTTCTGC TCGTCCGGCC CCCATGCAGC
CTTTCCGTCG ACGCGGAACC GAACAGCAGG CTGATGCTCG AGAAGGTTGA CTTGTCCGCG
TTACGCGACC AGTGCGAGGC CATTATCGCC GCTTTCAGGC GACTCGCGGT TGACGTGCTG
GTAGGGATGG TGCCGGACGA ATGCCCGCCC AACGTCGTAT TCCAACGCGA TCTGTTCCTC
ATGACTCCGG ACGGCGCGGT GCTGGGCAGA CCCGCGTCGC GGCAGCGGGC TGGGGAGGAA
CGGCACACTG CGGCGGTACT GGCTTCGGCG GGCTACCCGA TTCTGCGTAC CCTTACCGGC
CGGGCCACCT TCGAGGGGGC CGACGCGCTG TGGGCAGACC CGGAGCTGGT GCTGGTGGGT
ACCGGGTTCC GGACGAACAC TGCGGGCGCC CGTAAAGTCG GCGGCGCGCT GCGCGGCTGT
GGCGCACGGA CGGAGCGAAT CCCACTTGGC CCGGGAGTGC AGCATCTGCT CGGCACGGTG
GTGTTCCTCG ACCACCGGCT CGCCGCCGTG CACGCGGCGG CCGCGACCCC GCCGTTGCGA
GCGGTGTTGC ACGGGCTTGG CTTCCGGCTG CTCGACTTTG ATCCGACCGA GGAGCTGGTG
CTGCGGCGCG GGTTGAATCT GGTCGTGGTG GAGCCGGGGC TGGTGCTCAT GCCTTCGGGC
GCGCCCGGGA TCCGGCGTGC ACTCGGGGCC GCGGGGGTGC AGGCGGAGGA GGTCGAGATG
GGAGATTACG TCAAGGCCGC TGGGGGGTTG GGTTGCGTCA CAGGGATACT GCACCGCAGT
TGA
|
|---|
| Protein sequence | MTAQTPGSER LPSTLAGPGW HARVASHGAE VAEGRLWTRC GYRSEYARLR RVLLVRPPCS
LSVDAEPNSR LMLEKVDLSA LRDQCEAIIA AFRRLAVDVL VGMVPDECPP NVVFQRDLFL
MTPDGAVLGR PASRQRAGEE RHTAAVLASA GYPILRTLTG RATFEGADAL WADPELVLVG
TGFRTNTAGA RKVGGALRGC GARTERIPLG PGVQHLLGTV VFLDHRLAAV HAAAATPPLR
AVLHGLGFRL LDFDPTEELV LRRGLNLVVV EPGLVLMPSG APGIRRALGA AGVQAEEVEM
GDYVKAAGGL GCVTGILHRS
|
|---|
| |