Gene Francci3_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1738 
Symbol 
ID3906804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2073012 
End bp2073704 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content77% 
IMG OID637879076 
Producthypothetical protein 
Protein accessionYP_480843 
Protein GI86740443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00359989 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACGG CTCCGTCCTC GACGCCGCGT GCGGCGGGTC CGGACCGCGC CGGCCGGCGG 
ACAGGTGGTG CTCCGGCTGC CCGGCTGACG GGCGGTCCGC GGCGCCGCCG CCGGGTTCCG
TATCTACTGC TGGGTGTGGT GCTGGTGGTG GGCTGCGCCG CCGCCGGTCT GGTCGCGGGT
GCGCGGGTGG GGTCGCGGGA GCCGGTGCTG GTGCTGGCCC GGCCCGTGAC GGTCGGCCAT
GTCCTGGCCG CCGAGGACGT GCGGGAGGTG CGGATCTCCG CCGACGGCGT CGACACCATC
CCGGCCGGCG ACCGGGACAG CGTCCTCGGT AAGCCGGTCG CCTACAGCCT GCCCGCCGGC
ACCGTGCTCA GCCGCGCGGC GGTCGGGGCC GCGCAGGTCC CGCCGCCCGG GGAGGCGATC
GCGGCGGTCG CGTTGAAGGC CGGCCAGTTC CCCACCGGTC TGGCACCCGG CTCGCGGGTG
ACGGTCGTGG TCGCTCCCGC CACTAGCGCG GTAGCGACCG CGCCCGCCGG CAGCGCCCGG
TCGTGGCCGG CGACGGTCGT GGCCGTGGTG GCGGCGGACA CCGAGCAGAC GACGGTGGTC
TCTCTCCAGC TCGCCGAGGC CGACGCCCAC GCGTTGGCGG CGGCCCCGGC CGGACAGATC
GGCGTCGTCA CGATCAACGG AACCGGCGGG TGA
 
Protein sequence
MVTAPSSTPR AAGPDRAGRR TGGAPAARLT GGPRRRRRVP YLLLGVVLVV GCAAAGLVAG 
ARVGSREPVL VLARPVTVGH VLAAEDVREV RISADGVDTI PAGDRDSVLG KPVAYSLPAG
TVLSRAAVGA AQVPPPGEAI AAVALKAGQF PTGLAPGSRV TVVVAPATSA VATAPAGSAR
SWPATVVAVV AADTEQTTVV SLQLAEADAH ALAAAPAGQI GVVTINGTGG