Gene Francci3_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1657 
Symbol 
ID3903044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1990810 
End bp1992342 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content75% 
IMG OID637878995 
Productglycerol kinase 
Protein accessionYP_480762 
Protein GI86740362 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC CGGCACGCGG ATCCCTGGTG GCGGCGGTCG ACCAGGGGAC CACCGGGACC 
ACGGTCTGCC TGCTCGACCG GGACGGGGTG GTCGTCGGCC GCGGCTACAC CGGGATCCGG
CCCGGGTTCC CCCGGCCGGG CTGGGTCGAG CAGGATCCGG ACGAGCTCTG GCGCAGCGTC
GTCGACACCG TCGCCGCGGC CCTGGCCGGC TGCGGTCGCC GGGCCGGGGA GCTCGCCGCC
CTCGGCATCA CCAACCAGCG CGAGACCACC GTGCTGTGGG ACCGGCGGAC CTCCGCCCCG
GTCCACCCGG CCATCGGGTG GCAGGACCGG CGGACGGCCG CGGTCTGCGA ACGCCTCACC
GCCGAGGGGC ACGCGGGTGC GGTGGGGGAA CGCACCGGGC TGGTACTCGA CCCCTACTTC
TCCGGTACCA AGATCGGCTG GATCCTGGAC GACGACCCCG GGCTGCGCCG GCGCGCCGGC
CGGGGGGAGA TCGCCTTCGG CACCGTCGAT TCCTGGCTGG TCTGGAAGCT GACCGCCGGG
GCCGCGCACG TCACCGACGT CACGAACGCC TCCCGCACCC TGCTGCTCGA CCTCGCCGCC
GCGACCTGGT CCCCGGAGAT GCTCGATCTG CTGGGCGTTC CCGCCGAGGT GCTGCCCGCT
GTCGCGCCGA GCTCGCGGGT CTACGCCGAG ACCGATCCGG ACGCCTTCCT CGGCGTGCGG
ATCCCGGTGG CGGCCGTGAT CGGCGACCAG CAGGCCGCTC TGTTCGCCCA GGGCTGCTTC
GAACCCGGCC AGGCCAAGAA CACCTATGGC ACCGGTTCCT TCGTGCTGGT GAACACCGGC
TCGGCCCTGC CGGCGCCGCA GTCGACGCTG CTGCGGACCG CGGCGTTCCA GCTCGACGGC
GAACCGGTGC GGTACGCGCT GGAGGGAGCG GTCCTGTCCA CCGGTGCCGC CGTCGACTGG
CTACGGGACT CCCTGGGGAT CATCCGGGAT GCCACCGAGA CCGCCGACCT GGCCGCCTCC
CTGACCGGCA ACGACGGCGT CTACTTCGTC CCGGCGCTCG CCGGCCTCGG CGCCCCTCAC
TGGGATCCCC GCGCCCGCGG CGCACTGCTC GGGATCACCC GGGGGACCAC CCGGGCGCAC
GTCGTCCGCG CGGTGCTCGA GGGCATCGCC TACCGCACCC GGGACGTCGT CGAGGCGATG
GGTGCCGCGG GCTTCCCGGT GCGCGAGCTG CGGGCCGACA GCGGGGCCGC CCGCAACCAC
TGGCTCATGC AGTTCCAGGC CGACCTGCTC GGCGTCGAGC TCGACGTCCC GGACAACATC
GAGACGACCG CGCTCGGTTC GGCCTACCTC GCGGGGCTCG CGACCGGGTT CTTCGCCGAC
CGCGAGGAGC TCGCCGGGCA TCGGCGCAGC GCCGAGCGGT ACCGGCCGAG GCTGTCCCGG
GCCGAGCGGG ACCGGTCCTA CCGGCGATGG CTGCGCGCCG TGGACCGGGC CCGGGACTGG
GCCAAGGACG CCGACGACGC CGACTGGGAC TGA
 
Protein sequence
MSVPARGSLV AAVDQGTTGT TVCLLDRDGV VVGRGYTGIR PGFPRPGWVE QDPDELWRSV 
VDTVAAALAG CGRRAGELAA LGITNQRETT VLWDRRTSAP VHPAIGWQDR RTAAVCERLT
AEGHAGAVGE RTGLVLDPYF SGTKIGWILD DDPGLRRRAG RGEIAFGTVD SWLVWKLTAG
AAHVTDVTNA SRTLLLDLAA ATWSPEMLDL LGVPAEVLPA VAPSSRVYAE TDPDAFLGVR
IPVAAVIGDQ QAALFAQGCF EPGQAKNTYG TGSFVLVNTG SALPAPQSTL LRTAAFQLDG
EPVRYALEGA VLSTGAAVDW LRDSLGIIRD ATETADLAAS LTGNDGVYFV PALAGLGAPH
WDPRARGALL GITRGTTRAH VVRAVLEGIA YRTRDVVEAM GAAGFPVREL RADSGAARNH
WLMQFQADLL GVELDVPDNI ETTALGSAYL AGLATGFFAD REELAGHRRS AERYRPRLSR
AERDRSYRRW LRAVDRARDW AKDADDADWD