| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1641 |
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| Symbol | |
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| ID | 3905920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1973361 |
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| End bp | 1975127 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878979 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_480746 |
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| Protein GI | 86740346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0558371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGTGC TCGCCACGAT CCTGCTCGCC ACGGTCCTGG CTGCCACGGT GACCGCCTGC
AGCGGTGGCT CGGGGGACGG ATCGCGTGAG CTCGCTGCCA GTCCCACCCC GGCGACGACC
ACCACGCCCC CTCCGTCCGG CAAGCCGGGC GGCACGCTGC GGATCGTCAC CCAGTGGATG
CCCAGTGGCG ATCCGGGCTG GGCCGACCAG CCCGGCGAGC GGGCGGTCAG CCGGCTCGTG
ACCCGCCAGC TGTACAGCTA TCCCTCCGAC GAGGACACGA CGAAGTCGAC CATCCCGCGG
CCGGACCTCG CCGTCGGCGC GCCGGTCGTC ACCGAGAACG GGCTGGTCTA CACGGTGCGG
CTGCGTCCCG CGGCGCGCTG GGACACCCCC AACCAGCGCC GGATCACCGC CAACGACGTC
GCCCGCGGCA TCAAGCGACT GTGCACGCCC CCGAACCCGT CACCGCTGCG CGGCTACTTC
ACGGCGACCA TCGTCGGATT CCGGGAGTTC TGTGCCCAGC TGGCGGCGAC CCCGGTCGCC
GACGCCGCGG CCTTCGTCGA GAGCAGCACC GTGGAGGGCA TCGAGATCGT CGGCGACGAC
ACGCTCGCGT TCCACCTACT GGCCCCGGTG AACGACTTCG TGGACGTGCT GGCGCTGCCG
GCGGCCTCCC CGGTGCCGCT GGAGGCCCTG GCCTACCCGC CGGACTCGCT GGAGTACCTG
CACAACCTGG TCTCGGCCGG GCCGTACCGG TTCACGGTCG CCCCCGGCGA GGGGTACCGG
CTGTCGCGCA GCCCATCGTG GAGCGCGTCC TCGGACGGGA TCCGCCGCGC CCTGCCCGAC
CATATAACGA TCTTCGACGG CCTGAGTCCG GAGGCCATGC AGCAGGAGCT GGAGAGCGGC
GACGCGGACA TGTCGCTCGA CGGGAAGATA CCCGACAGCC GGGCCGTGGA GCTCGCCAGG
GCGAACGACC CCCGTCTCGT GGTCGACGGG GTCGGGGTCA CCCTGGCGCT CACCGTCGGA
TTCAATGGGC CCTCCGCGGC CGCGCTGCGT GAGCTGTCGG TCCGCCGGGC GCTGCCCTAC
TGCATCGACC GGGTGAGCCT CGCGGCGGCG CTCGGCGGCC CCGAGTTCGC CGCTGCCGCC
ACCGGGTTGC TGCAGGAGAC GATGACCGGC TACACCGACG CGGATCCCTT CCCGAGCCCG
GCGGGACTCG GCGACGCGGC CCGTTGCCGG GAGGCGCTGA GCCATACCCC CGGCGGACCC
GTCACGGCGC TGTCCCTGCT CACCACGGAC AGCGCCACCG ACGTGGCGGC CGCCGAAGCA
CTGCGGACCG CCTTCGCCCG TTCCGGTATC CGCCTCGACA TCCGGATCCG GACCGGCGAG
CGCTACCGTG CGGCAGCCGT CCACCCGACC GGGCAGTTCT GGGACCTGGC GCTCACTACT
ATCGCCCCGG ACTGGTACGG CGACGCGGGC CGCACCGTCT TCCAGCCGTT GCTGGACGAG
ACGTGGGCCG GCCCCAGGCC GGCCGACGGC GGCTACCGGG ATCCGGGCGC CCTGCATCTG
CTCGCCACGG CGCTGCGGGC CACCAGCGAG GCGACCGCCG CGAGCAACTG GGCCGACCTG
GAGCACACGC TGGTCGAGCA GGTCGCGGTG ATCCCGCTGG CCGTCGTGCA CACCCCGCAG
TTCCACAGCA CGAACGTCAC CGCGTTCACG ATCGTGCCGT CGATCGGCAC CGCCGATCCG
ACCGCGGTCT CGCTGGGGTC CGGATGA
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| Protein sequence | MSVLATILLA TVLAATVTAC SGGSGDGSRE LAASPTPATT TTPPPSGKPG GTLRIVTQWM
PSGDPGWADQ PGERAVSRLV TRQLYSYPSD EDTTKSTIPR PDLAVGAPVV TENGLVYTVR
LRPAARWDTP NQRRITANDV ARGIKRLCTP PNPSPLRGYF TATIVGFREF CAQLAATPVA
DAAAFVESST VEGIEIVGDD TLAFHLLAPV NDFVDVLALP AASPVPLEAL AYPPDSLEYL
HNLVSAGPYR FTVAPGEGYR LSRSPSWSAS SDGIRRALPD HITIFDGLSP EAMQQELESG
DADMSLDGKI PDSRAVELAR ANDPRLVVDG VGVTLALTVG FNGPSAAALR ELSVRRALPY
CIDRVSLAAA LGGPEFAAAA TGLLQETMTG YTDADPFPSP AGLGDAARCR EALSHTPGGP
VTALSLLTTD SATDVAAAEA LRTAFARSGI RLDIRIRTGE RYRAAAVHPT GQFWDLALTT
IAPDWYGDAG RTVFQPLLDE TWAGPRPADG GYRDPGALHL LATALRATSE ATAASNWADL
EHTLVEQVAV IPLAVVHTPQ FHSTNVTAFT IVPSIGTADP TAVSLGSG
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