Gene Francci3_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1635 
Symbol 
ID3905914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1966866 
End bp1967948 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content75% 
IMG OID637878973 
Producthypothetical protein 
Protein accessionYP_480740 
Protein GI86740340 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.919127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCA AGGGCGTAGC CGCGCGCTCC GACGGTCCGG ACCGGGCACC GGCGGTCGTC 
GCCTTCGGCG GCGGCCACGG GCTCGCCGCC TCGCTCGCCG CGCTCCGGCA GATCACCTCG
GCGCTTACCG CCGTGGTGAC CGTCGGTGAC GACGGTGGAT CCTCCGGGCG GCTGCGCGCG
GAGCTCGGCG CGCTCCCCAT GGGCGATCTG CGAATGGCCC TGGCCGCGCT GGCCGGACCG
GACGGATGGT CGACCACCTG GGCGGACGTG TTCCAGCACC GGTTCGGCGG CGACGGGCCG
CTCGCCGGGC ACGCGGTCGG CAACCTCGTG CTGACCGCGC TCGCCGAGCG CACCGGATCA
CCGGTGGCCG CGCTCGACTT GGCCGCCACC CTCCTCGGCG TGCGGGGGCG GGTGCTGCCG
CTGTCGACCA GGGGCATCGA TATCGTCGCC GACGTCGTGG GGCTGGATCC GGCGGCGCCC
ACCGCCGAGG TCGAGGTGCG CGGGCAGGCC GCGGTGGCCA CGACCGGTGG ACGGGTCGCG
GGTGTCCGGC TGTCGCCGGC GGCACCGCCG GCCTGTCCGG AGGCGGTGAC CGCGGCGGGC
GCGGCCGACT GGATCATCCT TGGACCGGGA TCGCACTACA CGAGCATGCT GCCGCATCTG
CTGGTTCCTG AGATGAACCG GGCGATCGCG ACGTCCCGGG CGAACCGGGT GATGGTGTTG
AACCTGACCG CCCAGCCGGG GGAGACCGAG GGATACACCC CCCAGGCCCA TCTCCACTCC
CTCGGCCGGC ACGTTCCCGG CCTGCGGCTG GACGTGGTGA TCGCCGATCC GACCGCCGTG
CCCGACCCCG ATCTGCTCGC CCGGGCGGCG GCGGACGTCG GTGCCCGGCT CCATCTGGCG
CCGGTGCGGA TCCCCGGCGC GCCCGTGCAC GATCCGGTCC GGCTCGCCGC GGCCTTCCGT
GCGGTGTTCG CGGGACTCCC GGAGGCGACC TGCCCGACGC CCGCGTCCCG GCGGCCGGTC
ACGCAGTACT CATCGTCCGG CGGACCGGTC CGCCGGACCC CATCCGGTGA AGCCAAGGAG
TGA
 
Protein sequence
MNLKGVAARS DGPDRAPAVV AFGGGHGLAA SLAALRQITS ALTAVVTVGD DGGSSGRLRA 
ELGALPMGDL RMALAALAGP DGWSTTWADV FQHRFGGDGP LAGHAVGNLV LTALAERTGS
PVAALDLAAT LLGVRGRVLP LSTRGIDIVA DVVGLDPAAP TAEVEVRGQA AVATTGGRVA
GVRLSPAAPP ACPEAVTAAG AADWIILGPG SHYTSMLPHL LVPEMNRAIA TSRANRVMVL
NLTAQPGETE GYTPQAHLHS LGRHVPGLRL DVVIADPTAV PDPDLLARAA ADVGARLHLA
PVRIPGAPVH DPVRLAAAFR AVFAGLPEAT CPTPASRRPV TQYSSSGGPV RRTPSGEAKE