Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1635 |
Symbol | |
ID | 3905914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1966866 |
End bp | 1967948 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637878973 |
Product | hypothetical protein |
Protein accession | YP_480740 |
Protein GI | 86740340 |
COG category | [S] Function unknown |
COG ID | [COG0391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.919127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCTCA AGGGCGTAGC CGCGCGCTCC GACGGTCCGG ACCGGGCACC GGCGGTCGTC GCCTTCGGCG GCGGCCACGG GCTCGCCGCC TCGCTCGCCG CGCTCCGGCA GATCACCTCG GCGCTTACCG CCGTGGTGAC CGTCGGTGAC GACGGTGGAT CCTCCGGGCG GCTGCGCGCG GAGCTCGGCG CGCTCCCCAT GGGCGATCTG CGAATGGCCC TGGCCGCGCT GGCCGGACCG GACGGATGGT CGACCACCTG GGCGGACGTG TTCCAGCACC GGTTCGGCGG CGACGGGCCG CTCGCCGGGC ACGCGGTCGG CAACCTCGTG CTGACCGCGC TCGCCGAGCG CACCGGATCA CCGGTGGCCG CGCTCGACTT GGCCGCCACC CTCCTCGGCG TGCGGGGGCG GGTGCTGCCG CTGTCGACCA GGGGCATCGA TATCGTCGCC GACGTCGTGG GGCTGGATCC GGCGGCGCCC ACCGCCGAGG TCGAGGTGCG CGGGCAGGCC GCGGTGGCCA CGACCGGTGG ACGGGTCGCG GGTGTCCGGC TGTCGCCGGC GGCACCGCCG GCCTGTCCGG AGGCGGTGAC CGCGGCGGGC GCGGCCGACT GGATCATCCT TGGACCGGGA TCGCACTACA CGAGCATGCT GCCGCATCTG CTGGTTCCTG AGATGAACCG GGCGATCGCG ACGTCCCGGG CGAACCGGGT GATGGTGTTG AACCTGACCG CCCAGCCGGG GGAGACCGAG GGATACACCC CCCAGGCCCA TCTCCACTCC CTCGGCCGGC ACGTTCCCGG CCTGCGGCTG GACGTGGTGA TCGCCGATCC GACCGCCGTG CCCGACCCCG ATCTGCTCGC CCGGGCGGCG GCGGACGTCG GTGCCCGGCT CCATCTGGCG CCGGTGCGGA TCCCCGGCGC GCCCGTGCAC GATCCGGTCC GGCTCGCCGC GGCCTTCCGT GCGGTGTTCG CGGGACTCCC GGAGGCGACC TGCCCGACGC CCGCGTCCCG GCGGCCGGTC ACGCAGTACT CATCGTCCGG CGGACCGGTC CGCCGGACCC CATCCGGTGA AGCCAAGGAG TGA
|
Protein sequence | MNLKGVAARS DGPDRAPAVV AFGGGHGLAA SLAALRQITS ALTAVVTVGD DGGSSGRLRA ELGALPMGDL RMALAALAGP DGWSTTWADV FQHRFGGDGP LAGHAVGNLV LTALAERTGS PVAALDLAAT LLGVRGRVLP LSTRGIDIVA DVVGLDPAAP TAEVEVRGQA AVATTGGRVA GVRLSPAAPP ACPEAVTAAG AADWIILGPG SHYTSMLPHL LVPEMNRAIA TSRANRVMVL NLTAQPGETE GYTPQAHLHS LGRHVPGLRL DVVIADPTAV PDPDLLARAA ADVGARLHLA PVRIPGAPVH DPVRLAAAFR AVFAGLPEAT CPTPASRRPV TQYSSSGGPV RRTPSGEAKE
|
| |