| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1630 |
|---|
| Symbol | |
|---|
| ID | 3905909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1959394 |
|---|
| End bp | 1960092 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637878968 |
|---|
| Product | beta-lactamase-like |
|---|
| Protein accession | YP_480735 |
|---|
| Protein GI | 86740335 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CCAACGGCGG CGACACCAGC CGCACCGGCT ACACCGAGTA CACCGGGAAA
GTCACGGTCG GCGGTCCGGC CGACGTGCGG ACCCTGCCAG GCCTGACGAT CACCAAGGTC
GCCGTCGGCC CGATGAACAA CAACGCCTAC CTGTTGCACT GCCCGGTCAC CGGGGAGCAG
CTGCTCGTCG ACGCGGCGAA CGAGGCCGAC ACGCTGCTGC GGCTTGTCGG GGACGCGGGG
CTGGCAACGG TGGTCACCAG CCATCGGCAC GATGATCATG TGCAGGCCCT CGCAGATGTG
GTCACCACCA CCGGGGCCAG CACGGTCGCC CATCCGGACG ACGCCCCGGC CATTCCGGTG
CCCACCGCGC GGCAGGTGCG CGAGGGGGAC GAGATCGCCG TCGGGACGGC GGCCCTTCGG
GTGATCCACC TGGTCGGGCA CACACCCGGA TCCATCGCCC TGCTCTACGA CGCCGATCCC
GCCGCTCCCC ACCTCTTCAC CGGAGACTGC CTGTTCCCTG GCGGCCCTGG AAACACGTTC
GGTGACGAAC AGGCCTTCAC GACGCTGATG GACGATCTCG AACGCAAGAT CTTCGGCCCA
CTGCCGGACA CCACCTGGAT CTACCCCGGC CACGGACACG ACACCACCCT CGGCGCCGAA
CGCCCGCACC TGGCGGAATG GCGCGCCCGC GGCTGGTGA
|
|---|
| Protein sequence | MSDANGGDTS RTGYTEYTGK VTVGGPADVR TLPGLTITKV AVGPMNNNAY LLHCPVTGEQ
LLVDAANEAD TLLRLVGDAG LATVVTSHRH DDHVQALADV VTTTGASTVA HPDDAPAIPV
PTARQVREGD EIAVGTAALR VIHLVGHTPG SIALLYDADP AAPHLFTGDC LFPGGPGNTF
GDEQAFTTLM DDLERKIFGP LPDTTWIYPG HGHDTTLGAE RPHLAEWRAR GW
|
|---|
| |