Gene Francci3_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1615 
Symbol 
ID3905893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1937989 
End bp1938537 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID637878952 
Producthypothetical protein 
Protein accessionYP_480720 
Protein GI86740320 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTG TTGTTGTGTA CGAGTCGATG TTCGGGAACA CGAGGCAGAT TGGCCAGGCG 
ATTGCGGATG GCATCGGCCC GCTCCATGAG GTAGTCGTCA TCCCGGTGCG TGACGCAAAT
CCTGAGGTGA TCAGCGGTGC CGACGTCGTC GTCGTGGGCG GTCCCACGCA TGTGCACGGC
ATGAGCCGTC CGGCCAGCCG TACGTCGGCC GGCGAGATCG CTCGGAAGCC ACCGAGCGGT
GTGGCGCTCG AGCCCGGCGC AGAAGGCCCC GGACTGCGGG AATGGTTCGC CCGCTGCGGC
GTGATCGAGG GGTATGCGGC AGCGTTCGAT ACGCGCGCAC ACGGGCCCTC GATCTTGACT
GGCCGGGCGT CAAAGCGCAT TCACCGGCTG CTGCGCCGGC ACGGAGCGCG ACAGGTTTGC
CCGCCGGAGA GCTTCTTCGT GACGAAGGAC AACGCACTCG CACCAGGGGA GATCGACCGC
GCGCGCCGGT GGGGCGAACA CCTGTCGCAC GTGGCCACAG AGCCGGCGAG GACCGAGTTT
CCGGTCTGA
 
Protein sequence
MRVVVVYESM FGNTRQIGQA IADGIGPLHE VVVIPVRDAN PEVISGADVV VVGGPTHVHG 
MSRPASRTSA GEIARKPPSG VALEPGAEGP GLREWFARCG VIEGYAAAFD TRAHGPSILT
GRASKRIHRL LRRHGARQVC PPESFFVTKD NALAPGEIDR ARRWGEHLSH VATEPARTEF
PV