| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1595 |
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| Symbol | |
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| ID | 3903730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1913893 |
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| End bp | 1915905 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878932 |
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| Product | ABC transporter related |
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| Protein accession | YP_480700 |
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| Protein GI | 86740300 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.12327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.499354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGTC AGGGTTGTGC TCCGCGGGAG GCTCTTCGCC GCCTCGGCGC GCGTCGGCAT
AGCCTCGGCG GCGTGATCCG TGAGCCGCTG CCCGTCCCGT CGGAGACGGC CTTCCCGTCG
TGGGTGATCC GCTTGCATGC GCGTGCGCTC GCGCGGTTGA CCGGCGCGCC CGAGGCGCGG
CGCAGCGTCC GGTTCTTCGC CGACCAGGGC CGGGTCGTCG CGGTCCTCGT CGGGCTGTCC
GTTCTCGGTT CGGCCGCCGT CGCCGTCGGG CCGTTCGTCC TGCGCCATCT CATCGACACG
TCGTTGCCCA CCGGCCAGGT GCGTGACCTC GTCGTCCCCG TTCTGCTGCT GTGCGCGGTG
CTGGTGTTCG AGTCGAGCGT GCTTTCGGTG CGCATGGCGC TCATCGCTCG GCTCGGCGGC
GTTGTCTCCG TGCGGATCCG TCAGACGGTG AACGCTCACC TGCAGCGCCT GCCCTTCGCC
TTCTTTCCCC GCAGCCAGCA GGGGGAGGTG ATGACGGTGA TGTCCACCGA CGTCCTGAAC
GCCCAGAACG CGATTTCCGC CACCGTGCAG GCGGTGGTCT GCCGGATCGC GGACATCGTC
GTCGGCTCGA TCGTCGTCTT CGTGCTGGAC TGGCGTCTGA GCCTGGCGGT GATGGTCTTC
GCGCCGGCCA CGCTGCTGAT CGTCCGCTCG GGCCGGCGGC GGCTCGCCGC GCTGTCCATC
CGCCAGCGGG AGCTCGACGG TCTGCTCATG GTCCAGGTCG CCGACACCTC GTCGGTCTCC
GGGGCGCTGC ACGTGCGGCT GTTCGACCGG GTCGACTACG AGCAGACCCG CTTCGACGCG
GCGGGCGCCG AGCTGCTCGC CGCCGCCGAG GATCAGGCCC GGCTGATGTC GCGGGTCCGG
TTCCTGGTCA ACCTCGGGAT TATCGCGACG ATGACGGCGG TGCTGGCGCT GGGGGCCTGG
CTGGTCTCCA GCGGTCGCAT CACGCTCGGG ACGGTCGCAG CCCTGGGCGG CGCGTTGCTG
GTGGCCTTCG GACCACTGTC GTCCGCTGTC AACCTGCGTG CGGAGCTCGC GGGTGCGGGC
GCGTCCTTCC GGCGGATCTT CTCCCTGCTT GACGTCCCGC AGGACGAGGT ACGCCTGAGG
TTCGAAGGGG CCCGGGCCCC CGCGCTGACC GTCCCCCGCG CACCGCGGTC CGGGACGGAA
CCGGTGCCGG CCGCCGCTCG CTGGGGAGTC GATGCCGGCC GGGGACTCGA TCTGACGTTC
GACGACGTAT GGTTCTCTTA CGATCTTGCC ACGGCCGAGG ACCGGCCGGA CGGCGACTGG
CCGGACGACG ACCCGACGTG GAACCTGCGC GGGGTGACCC TGAAAGTCGC CGCGGGGACG
ACGACGGCGA TCGTCGGGGC CAGCGGGGCC GGCAAGACGA CCATCACCTA TCTGGCCAGC
GGCATGCACC GGCCGCGGCG CGGCGGCATC CGTCTCGGCG GGGTTCCCCT CGACGACATC
CCGCCGGATA GTCTGCACAC GATGATCGGC GTCGTCCCTC AGGACCCGCA TCTGTTCCAT
GACACGATCG CGGCGAACCT TCGTTACGGC CGGTTGGACG CAACCGACGA CGAGCTGCGT
GCCGCCCTGG CGGCCGCCAG CCTCTCCGCC CTGCTCGACC GGCTGCCCGA GGGCCTGGCG
ACCCGGGTCG GCGCCCGGGG CTACCGGTTG TCCGGTGGTG AGCGGCAGCG GTTGGCCATC
GCCCGGGTCC TGCTGCAGTC ACCACGGGTG CTGGTGCTGG ACGAGGCGAC CTCGGCGCTG
GACACCGTCT CCGAGGCCGC CGTGCGCACC GCCCTGGACC GGCTCGCGGT GGGGCGGACG
TGCCTGGTGA TCGCGCACCG GCTGTCCACG GTGATTGACG CCGACCGCAT CTACGTGATG
GACCACGGCC AGATCGTCGA GGACGGCACG CACAGCGAGC TGCTCGCCGA CGGCGGCGCC
TACGCCCGCC TCTACCGGCC CACCGTCGTC TGA
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| Protein sequence | MGRQGCAPRE ALRRLGARRH SLGGVIREPL PVPSETAFPS WVIRLHARAL ARLTGAPEAR
RSVRFFADQG RVVAVLVGLS VLGSAAVAVG PFVLRHLIDT SLPTGQVRDL VVPVLLLCAV
LVFESSVLSV RMALIARLGG VVSVRIRQTV NAHLQRLPFA FFPRSQQGEV MTVMSTDVLN
AQNAISATVQ AVVCRIADIV VGSIVVFVLD WRLSLAVMVF APATLLIVRS GRRRLAALSI
RQRELDGLLM VQVADTSSVS GALHVRLFDR VDYEQTRFDA AGAELLAAAE DQARLMSRVR
FLVNLGIIAT MTAVLALGAW LVSSGRITLG TVAALGGALL VAFGPLSSAV NLRAELAGAG
ASFRRIFSLL DVPQDEVRLR FEGARAPALT VPRAPRSGTE PVPAAARWGV DAGRGLDLTF
DDVWFSYDLA TAEDRPDGDW PDDDPTWNLR GVTLKVAAGT TTAIVGASGA GKTTITYLAS
GMHRPRRGGI RLGGVPLDDI PPDSLHTMIG VVPQDPHLFH DTIAANLRYG RLDATDDELR
AALAAASLSA LLDRLPEGLA TRVGARGYRL SGGERQRLAI ARVLLQSPRV LVLDEATSAL
DTVSEAAVRT ALDRLAVGRT CLVIAHRLST VIDADRIYVM DHGQIVEDGT HSELLADGGA
YARLYRPTVV
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