Gene Francci3_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1546 
Symbol 
ID3904778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1855139 
End bp1855939 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content76% 
IMG OID637878883 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_480651 
Protein GI86740251 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC TTGCCGTTCC CCGACAGCAC GCCCCCGGGC GGCACGCCCC CGGGCGGCAC 
GCCCCCGGGC GGCCGGGACC CGACCGGCCG GAGCCCGGGC GGCACGCGAC CGGCCAGCAT
GTGCTGAACA ACCCCGTCCG TTCCTCCCTC CTGGGTCCGC ACGCGCATTT CGCCGAGCGG
GTCGGTGACG TGCTGCGCTA CCCGGTCGGC GTGTCACCGT TCGTCGCCCT GCCGGACGTG
CCCGACGAGA GCACCTGGCG CAACGTCGCG GCGCTGCTCG GCCCGGGCGC GATCGCGCCG
TTCACCGGCA TCGACGCTTC CCCGCCGCCC GGCTGGGGGG ATGCGATCTT CGACGGCGCG
CAGCTCGTAG ACGAGGGGGT CGACGCGCTC CCGGACGAGG AGGCCGTGCG GCTGGGGACC
GCGGACGTGC CGGAGATGCT CGCGCTGGCC GAACGCACCA AACCCGGGCC GTTCCTGCCT
CGCGCGATCG AGCTCGGCAC GTACCTCGGC ATCCGGCGGG ACGGCACGCT GGTGGCGATG
GCCGGGGAAC GGCTGCACCC GCCCGGCTGG ACCGAGATCA GCGCCGTCTG CACGGACGCG
GACCACCGGG GCCAGGGCCT CGCGACCCGG CTCGTCCGCG CGGTCGCCGC GGGCATCCGG
GCCCGCGGGG AGACACCGTT CCTGCACGCC GCGGCGACCA ACACGAACGC GATCCGGCTC
TACGAGTCGC TCGGGTTCCG GCTGCGGCGT GAGGTGACGT TCCGCGCCGC GCGGATACCG
GACATCGAGC CGGCCGCGTG A
 
Protein sequence
MTELAVPRQH APGRHAPGRH APGRPGPDRP EPGRHATGQH VLNNPVRSSL LGPHAHFAER 
VGDVLRYPVG VSPFVALPDV PDESTWRNVA ALLGPGAIAP FTGIDASPPP GWGDAIFDGA
QLVDEGVDAL PDEEAVRLGT ADVPEMLALA ERTKPGPFLP RAIELGTYLG IRRDGTLVAM
AGERLHPPGW TEISAVCTDA DHRGQGLATR LVRAVAAGIR ARGETPFLHA AATNTNAIRL
YESLGFRLRR EVTFRAARIP DIEPAA