Gene Francci3_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1525 
Symbol 
ID3904991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1826832 
End bp1827683 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID637878862 
Producthypothetical protein 
Protein accessionYP_480630 
Protein GI86740230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.154932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.941733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGAG GGCTACTCAT CCACCGTCGG CGCCGAAAGT CGGCGCAGCC GGAGCCGGAC 
GACCATGCCG GCACCGGGGC CGGTACCGGG GCCGGTACCG CGGCCGGTAC CGCGGCCGGT
AAGGGCGACG GTGACGCGAG GAAGCCCGGT GAAACGGGAA CCGGTGCCAC GGGAACCAGC
GCCACGACGA GCGGGGGCGC CCGGCTGGGC CGGGGTCCGT TCGACGCGGT GGACGCGCCC
GATGACGGCC GGGCGCGAGC GGATTTCGGA GCTCTCGTGG TGCCGCGGGT GAACGGCACC
CGGATCCGGG TCTCGGCCTC CGGGCCGATG CCCACCCTGG CCGCGATGGA CGGGACATCC
GTCCTGGAGC TGTCCGTCCT CGCCGCCCCG CGCAGCGGCG GCCTGTGGGC GTCGATCCGC
GAGGACCTGG TGCTCTCGGC ACCGGAGGAC ACGGAATGGA ACGACGAGGA CGGGCCCTAC
GGCCCCGAGC TGCGCATGCC GCTCGACACG GCCGTCGGCC GCCTGCCCGC CCGCATCTTC
GGCATCGAGG GGCCGCGGTG GATCCTCTGT GCGGTCATCA CCGGTGCGGC CGCGGTCGAC
GTGACGGCGG CGCCGCTGCT GGAGGAGGTA CTGGACGGGC TCGTCGTCGT CCGGGGGGAC
GCGGCGATGC CGGTGCGCGA GCCCATCCCC TTCGAACGTC CCGACAGATT CGACCGTCCC
GACCGTCCCG ACCGTCCCGA CCGAACAACC GACACCGCCG CGGCCATTCC GGAGCAACCC
CCGGAACGCA GGATCATGAC GCTGGCGCTG CGGGGCGCCA ACCGCGAGGC CCCCCCACCC
GCGGCGTCGT GA
 
Protein sequence
MLGGLLIHRR RRKSAQPEPD DHAGTGAGTG AGTAAGTAAG KGDGDARKPG ETGTGATGTS 
ATTSGGARLG RGPFDAVDAP DDGRARADFG ALVVPRVNGT RIRVSASGPM PTLAAMDGTS
VLELSVLAAP RSGGLWASIR EDLVLSAPED TEWNDEDGPY GPELRMPLDT AVGRLPARIF
GIEGPRWILC AVITGAAAVD VTAAPLLEEV LDGLVVVRGD AAMPVREPIP FERPDRFDRP
DRPDRPDRTT DTAAAIPEQP PERRIMTLAL RGANREAPPP AAS