Gene Francci3_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1504 
Symbol 
ID3904970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1796616 
End bp1797506 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID637878841 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_480609 
Protein GI86740209 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGAT CGAGTTCCAC GCCGGGATCG AGATTGGCGC CGGGGGCAGG CTCGGCGCCG 
CCGGGGGCGC CGGCTTCGAC GTCAGGGACG GCTACCGGAG TAACGGGTAC CGGAGTAAAG
AGGGTGGATC CGCGCCTGCT CGCGAGCCTG CTGCCCGCCG CGGCCGTCGC CGTCGAGGCG
TTTGAGGACG ATCCCTCGGC TGTGCTATTC CCCGAGGAGG CTGCGCTGCT GAGCCGCGCG
GTCGACAAGA GGCGCCGCGA GTTCACCACC GCCCGGGTAT GCGCGCATCG CGCGCTGGAG
GGGCTCGGAC TTCCGGCGGC GCCGATCCTG CCCGGTTCCC GCGGCGCACC CGGCTGGCCG
GACGGAGTGG TGGGAAGCAT CACCCACTGC GCCGGCTACC GGGCGGCCGC GGTGGCCCGG
GCGGCGGAGG TCCACACCAT CGGCATCGAC GCCGAGCCGA ACGAGCCCAC ACCCGGCGGG
GTGCTGAAGG AGATCACCGT TCCCGCCGAG GCGGGCTGGC TCGCGGCCCT CACCCGCACC
CGCCCGGCCG TCTGCTGGGA CCGGCTGCTG TTCAGCGCCA AGGAGTCTGT CTACAAGGCG
TGGTACCCGT TGGCGGAACG TTGGCTCGGC TTCGGGGACG CCGCCCTCGT GATCCACCCG
GGCACCGCAC CTATGGGCCC GCCGGCACCG AGCCCGGCCG CCCGGGGCAC CTTCACCGCG
AAACTCCTGG TGGCGGGACC ACGGCTGGCC GGCGGTGAGC TGACCGGCTT CGGCGGTCGT
TGGCTCTCGG CCCGCGGCCT GCTGGTCACC GCGATCACCG TGCCGCACCT GGACGGCATC
CCCATGACGA CGGCATCCCC CCAGACGCAT CCTGCCTATC CAGAGGGATA A
 
Protein sequence
MPGSSSTPGS RLAPGAGSAP PGAPASTSGT ATGVTGTGVK RVDPRLLASL LPAAAVAVEA 
FEDDPSAVLF PEEAALLSRA VDKRRREFTT ARVCAHRALE GLGLPAAPIL PGSRGAPGWP
DGVVGSITHC AGYRAAAVAR AAEVHTIGID AEPNEPTPGG VLKEITVPAE AGWLAALTRT
RPAVCWDRLL FSAKESVYKA WYPLAERWLG FGDAALVIHP GTAPMGPPAP SPAARGTFTA
KLLVAGPRLA GGELTGFGGR WLSARGLLVT AITVPHLDGI PMTTASPQTH PAYPEG