Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1498 |
Symbol | |
ID | 3904964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1792574 |
End bp | 1793860 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637878835 |
Product | biotin carboxylase-like |
Protein accession | YP_480603 |
Protein GI | 86740203 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTGTCC TGGTGATCGG ATTCGGGCAG GCGTTGCTCA ACCAGCTGGG TTCGGCGCTG CCGCCGGGCA GTGTCACCCT CGTCGAGGAC CCGGATCTGA TCGACCGGCG GCGAGTGCGG CCGGCTGTCG AGAAGCTGCC CTGCGTGGCG GCCCTGCTCC CGGCGGCCTA CCACCAGAGC GAGGACTTCC TCCCCGTCGT GCTCGCAGCG GCGGCCACCG GGGGACCCTT CACCGCCGTC GTCCCGGCCC TGGAGTACAG CGTCCCCGCC GCGGCCTTGG CCGCGGCCGC ACTGGGCCTG CCGGGCGCGG GAGTCGGGGC CGCCCGATGC CTGTCGGACA AGATCGAACT GCGCCGGGCG GCGACGGCGG CGGGCATCGC GACCCCGCGC TGGCGGGAGG TCTTCGGCCC GGATGACCTC GCGGCCTTCG GGGTGGAGAG CCCGGTGGTG CTCAAACCCG CCAACCGGCA CGGCAGTCTC GGCGTGCAGA TCCTCGACGC GGTGGAGGAC GGGCCGCTCG ACCTGGCGGC CATCTGGTCG GCGACGGTCG CCGCCCTCGA CGACGGCGCG CTTCCCAACC GCCCGTTGCA CTGGCGCTAC CTGGTGGAGA GCCGGATGGT CGGCGCGGAG TTCAGCGTGG AGGCGCTGGT GCGCGACGGC GTGCCGAGCT TCGTCAACGT GACGGCGAAG CGGGTGCTGC CCGGGCGGCA CCCGGTCGAG ACCGGGCACG TCGTGCCGGC CCCCGGACCC GCGGCCAGGA CCGCCGTGCT GAGCCGCGCG TTGACGCGTC TCATCGCGGC GATCGGCTTC GGGGACGGCA TCCTGCACGC CGAATGGATG CTGACCGCCC GCTGCCCGGA CGACCCGGTG CTCATCGAGT GCGCCGGGCG GATCCCCGGT GACAGTCTGG TCGAACTCAT CGACTTGGCC TACGGAACCT CGCTGGCCGC GGACTACCTG GAGATTCTTT CCGGGGGGCG GCCCGCGCCG GCCGCGGTGG CGAGCGCCGC TGCGGCGATC CGCTTCCTGA GTGCCTCACC CGGTCGGGTC GACGCGGTCG ACGGCGTCGA GGTCGCGCGG GCGGTGCCCG GGGTGCGGCG GGTGGCGCTG GCGGTCACCC CGGGCACGTC CATCCCGCCG CTGCGCTCGT CGGGCGACCG CATCGGCGAG GTGTTGGCGG TCGGCCCGAC CCCGATGGAT GCCGAGGCCA CGGCGGCACG CGCCGCCGGG CTGGTGCGCG TGGCGGCGGC AGGGGCTCCG TTCGGCGCGG CTGTCATGCG GATCTAA
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Protein sequence | MRVLVIGFGQ ALLNQLGSAL PPGSVTLVED PDLIDRRRVR PAVEKLPCVA ALLPAAYHQS EDFLPVVLAA AATGGPFTAV VPALEYSVPA AALAAAALGL PGAGVGAARC LSDKIELRRA ATAAGIATPR WREVFGPDDL AAFGVESPVV LKPANRHGSL GVQILDAVED GPLDLAAIWS ATVAALDDGA LPNRPLHWRY LVESRMVGAE FSVEALVRDG VPSFVNVTAK RVLPGRHPVE TGHVVPAPGP AARTAVLSRA LTRLIAAIGF GDGILHAEWM LTARCPDDPV LIECAGRIPG DSLVELIDLA YGTSLAADYL EILSGGRPAP AAVASAAAAI RFLSASPGRV DAVDGVEVAR AVPGVRRVAL AVTPGTSIPP LRSSGDRIGE VLAVGPTPMD AEATAARAAG LVRVAAAGAP FGAAVMRI
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