Gene Francci3_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1495 
Symbol 
ID3903132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1789643 
End bp1790245 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID637878832 
ProductTetR family transcriptional regulator 
Protein accessionYP_480600 
Protein GI86740200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.969103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG CGGCAGCGAT GGAGGTCGTG GACACGCACG GCGCGGGCGC GTTCAGCATG 
CGGGCCCTCG GCGCGTTCCT CGACGTGGAT CCCACGGCGA TGTACCGACA TTTCGCGACG
AAGAACGCGC TGCTCGACGC GCTGACGGAC ACGGTGATCC GCGGGGTGGA GGAGCTGCCG
GAGACCGACG ACCCCCGCCG GGACATCCGG GAAAACTTCC GTCAGCTCCG ACGCTCCCTG
CTGGCGCATC CGACCCTGGC GCCGCTGGTG CTGCGCCGCC CGCCCGGGGT GGGCGCCTAC
TGGGAGCGGG CTGATCACGC GGTCGCCCAG CTTCACCGCG CAGGCATGGA TCCGGCCGAC
GCCGCCAACG TCTACCAGAC GCTGCTCTTC TACACCCTCG GCCACACCCT CAGCGAGGCC
CGCCAGCTCG CCCGGGCCGT GGAACGGGAG GGGGCCGGCG CCCGCGGCGG CCCGGTCGCG
GCGGTACGCC CGCCGGCCGA ACACCACCCG GATCTCTCCG ATGCGGCACC CCATCTACGG
GAGGAGAACG AGGCCCAGTT CCTCGCGGGC CTCGACCTCA TCCTGCGCGA TCTCCCCCGT
TGA
 
Protein sequence
MLLAAAMEVV DTHGAGAFSM RALGAFLDVD PTAMYRHFAT KNALLDALTD TVIRGVEELP 
ETDDPRRDIR ENFRQLRRSL LAHPTLAPLV LRRPPGVGAY WERADHAVAQ LHRAGMDPAD
AANVYQTLLF YTLGHTLSEA RQLARAVERE GAGARGGPVA AVRPPAEHHP DLSDAAPHLR
EENEAQFLAG LDLILRDLPR