Gene Francci3_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1482 
Symbol 
ID3903119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1774481 
End bp1774849 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content73% 
IMG OID637878819 
Producttranscription factor WhiB 
Protein accessionYP_480587 
Protein GI86740187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.514846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.360142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG GCGTCCCGGT TCTTCCCGGC CGTGATCTGC CGCCACAGCC GTTCGGAGCT 
GGTTGGCCCG CCTACTGGCG CCAGGAAGCG GCCTGCCGCG ACGGCGACCC GGACGCATTC
TTCCCGCCGG ACGGCCGCAA CACGAAAGCC CGGGCCGCGG CCGAGAGGCG GGCCCGCAAG
ATCTGCTCCG ACTGCCCGGT GCAGCGCCCA TGCCTGGCCA CCGCGATCTT CTGTCAGGAA
GAGCACGGGG TGTGGGGCGG CCTGACCTCG GACGAGCGTG CTTCCGTCGT CCCCCGCGGG
CGGCTGAGCG CGGACGACGC CCTGGTCTTC GCCGACCGGC TGCTGCTGTC CGTGTCGGTC
GCGAGCTGA
 
Protein sequence
MSAGVPVLPG RDLPPQPFGA GWPAYWRQEA ACRDGDPDAF FPPDGRNTKA RAAAERRARK 
ICSDCPVQRP CLATAIFCQE EHGVWGGLTS DERASVVPRG RLSADDALVF ADRLLLSVSV
AS