Gene Francci3_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1469 
Symbol 
ID3903106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1760981 
End bp1761757 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID637878807 
ProductMerR family transcriptional regulator 
Protein accessionYP_480575 
Protein GI86740175 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0887109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG GCCTCGCCGC GGCATCGTCG GCCCCGCGTT CGGGCGCAAC GCGCTCGGAC 
CAGGCCGGAC AGAACGCGAA GGTGCTCAAC ATCGGCCAGG TTCTCGACCG TCTGCGGGCG
GACTTCGCCG ACATCACCCT GTCGAAGATC CGCTATCTCG AGGCGGAGGG ACTCGTCGAA
CCCGCCCGTA CCAGCGCGAA CTACCGCAAG TACTCGGTCG ACGACGTCGC CCGGCTCCGT
TACGTCCTGC ACGCGCAGCG GGAGCGCTTT CTTCCGCTGC GCGTGATCAA GGAGGAGCTG
GCGTCGCTCG ACCGCGGTGA GACCCCGGTG CATCGGCCTG GACCCCGCGC GCTGCCCCCG
CATCCGGCCC CTACCGGCCT GGACGCGTTC CTCGGGGCGG AAAGGGTCAG AATGTCGCGC
CGGGAGCTTC TCGCCGCCGC GGGGCTCGGC GACGAGGCCC TGACCGAGCT GGAACAGCAC
GGCCTGGTGG GTCCGATCGC CGGCGGCGGG TACTACGATT CCGACGCCCT GCTCGTCGCG
CGGACCGTGG CGCTGCTGGC CGGCCACGGC GTGCAGCCCC GGCATCTGCG GGCCGCCCGT
ACGGTGGCCG ACCGTGAGGC TGGTCTCATC GAGGCCGCCG TCGCCCCGTT GCGGGGCCAG
CGCGGTGGTG AGGGTTCGGG ACGGCACGCC GAGACCGCCG ATGAGCTGGC GGCGTTGCTG
GTCCGCTTGC ACGCGGCCCT GTTGCGCTCC CGGCTGGCGG CGGGACGATC GAGTTGA
 
Protein sequence
MSGGLAAASS APRSGATRSD QAGQNAKVLN IGQVLDRLRA DFADITLSKI RYLEAEGLVE 
PARTSANYRK YSVDDVARLR YVLHAQRERF LPLRVIKEEL ASLDRGETPV HRPGPRALPP
HPAPTGLDAF LGAERVRMSR RELLAAAGLG DEALTELEQH GLVGPIAGGG YYDSDALLVA
RTVALLAGHG VQPRHLRAAR TVADREAGLI EAAVAPLRGQ RGGEGSGRHA ETADELAALL
VRLHAALLRS RLAAGRSS