| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1403 |
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| Symbol | |
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| ID | 3903384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1688201 |
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| End bp | 1690753 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878740 |
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| Product | transglutaminase-like |
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| Protein accession | YP_480509 |
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| Protein GI | 86740109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0925352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00325186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCACAG TGATCGCCAC CGTCGCCTGT CTGCTGTCCA CCAGCGCGCT GACCCGTCTG
TTCGAGGGTG TCCTCTGGTG GTTCGGGCCG GTGCTCGTTG CCACGACCGT GGCCGTCGGG
ACGGGGGTGG CGAGCCGCCT GCTCCGGCTG CCGGCGGCGG CCGAGATCCT GCTCAGTCTG
GTCGGCCTCA TCGGCACCGT CACCGTGCTG TCCGCGCGGT CGACGGCGTT GCTGGGCTTC
CTGCCGACCG CCACCACGGT CGAGACGCTG CACACGCTCA TCTCCGCCGG CGGCTCCGAC
ATCTCACGGC TGGCCGCGCC GGTGCCCGCC CGGCCGGGCC TGGTGGTCCT CACGGTGATC
GGCGTCTACC TCCTGGTGAT GATCGTCGAT CTGATCGTGG TGAAGTTCGA CCACCCGACG
CTCGGCGGCC TTCCGCTGCT GGCGCTGTAT GCGGTGTCGG CGGCGATTCT GCCCGGGGGG
GTCGGCGTGG TGCCCTTCCT GCTCGGCGCG GTGAGCTTCA TCGCCCTGCT CCTGCTCGAC
GGGCGGTTGG CGTACGAGCG ATGGGGCCGG ACCGTCTCCG ACCAGCGGAG GGCTGGCGTC
GAGATGTTCG GCGGTCGCAT CGCCGTGGGC GCGCTCGGGG TCGCCGTCAC CGCGCTGGTC
GCCGCGATCG TGGTGCCGCT TGGCCTGCCG TCCCTTGACG GCGAGGGACT GGTGTCGCGC
AAGGGTGGAT CCGGTGCCGG GGACGGTCCG AGTTCGGCCA GCGTCGTGCA GCCGATCGTC
TCGGTGAGCC AGCAGCTGCA CGCCAGCACG GAGGTGCCCC TGCTTCGGCT GCGCTCCGAC
GAGCCGAAGT ATCTGCGACT GACGGCGCTG GAGAACTTCG ACGGCCAACT GTTCACCCTG
CGGGCGTTGA ATGCCACCCG GGAAGACCGG GTCAGCGAGG GATTACCGAA ACCACGGACG
GGCGGCGCTA CCCAGTCGGT GCGTGCGGAG GTGGCCGTCA CCGGGCGGTT CAACGAGCTG
TATCTGCCGG TTCCGGGCAT CCCAATCCGG ATCGAGGGGC TGACCGGCGA CTGGCGGCTG
GCGAGCCCGA CAGGCACGAT CTTCTCGACC CGGACCTCGA CGGCGAACGC GCACTACCAG
GTGGACGCGG TGGTGCCGAA TCCCACAAGC GCACAGCTTC AGGCCGCGAC CGGGCCGATC
CCGGACTCGC TCGGCGTCGC GACCGCGCTC CCTGACAATC TCGATCCCCA GCTGCGTCAG
CTCACCAAGG CCGTGACCGC GGGTGCGCGC ACCCCCTATG AAAAGGTGTA CGCGATCCAG
GAATACCTGC GGGGGCCGCA GTTCACCTAC GACCTCCGGG GCGCCCCCAC CACGCAGGAG
GGCGCGCTCA GCCAGTTCCT GTTCGACACC CACCGCGGCT ACTGCGAACA GTTCGCCTCG
GCCATGACGG TCATGGTGCG GATACTGGGC CTACCCGCCC GGGTCGCGAT CGGCTTCGTC
CCCGGGGAGC GGCAGAGCGA CGGCAGCTAC GTCATCACCA ACCGGCAGGC GCACGCCTGG
CCCGAGGTCT GGTTCCCGTC GATCGGCTGG ATCAGCTTCG AGCCGACCCG CCGCAGCGAC
GGAACCACCT CGGCGCCGTC CTACGCCCCC GCCGGGCCCG AGGACCCCGA CAACGACGCC
GCCCTGCCGG AAGAGCAGGC TCAGGCCGAA CCGCAGGCAG TGCCCGAGCC GGTGCCCGTG
CCGGATACCT CCACGCCGGC TCCCGGCGAC GATCCGACCG CGATGGGCGC TGCGCGGTCA
GGTGACGACG CATCGACCTC CACCGAAATT CCCTCCTGGG TGGTCTGGCT GTGCGCTGCC
CTGCCCGTCC TGGGCCTGCT AGCCGTTCCG GCGATCATCC GGATCCGGCG GAGGCGGGTC
CGGCTGCGCC CGGCCGAAGA CGATCCCCCA GATCCGTCTG GGGCGACGGT GGAACGGGTC
CACGACGCCT GGGCGGAACT GCTGGACGTC GCCGCGGACC TGGGAATCAT GATCCGGCCG
AACGACTCGC CGCGGGCCGG AGTGGCCCGG CTGACCGCCT ACCTGGACGC CGAGCCGACC
ACCGCACAGG CTCCGGGATC CGGCCCGGAA CCGTCTGCGT GGCAGTCCGG GGGCAGCGAG
CCCCCCACGA CCTACCCGCA GGCCCGCGCG GCACTCGCCC GACTGGCCTC CGCGGAGGAG
CGGGCCCGCT ACGCGCCGCC GGAGATGGCC GCGCCGCCGT CCGTCGCAGA CCTCAGCGAA
GATGTCGTCC TGGCCACCAC CACGCTGTTG GCGCTGGCAC CGCGGGCCAG GCGGATGTTG
GCGCGGATCG CCCCGGCATC GGTTCTCCGG CGCGCCGCGC CGGCCTCGGC GCGCGGACGG
TCGAGGATGG GACGGGGAGG CGGTAAGGAC GACGGACCCG CCACGCCCAC CACGGTTCAG
AACGAAGACA ATCAGGACAA TCAGGACTGG CTGGACGCGG TCAGGGACGG TCCTCCCAGC
GCCGCCGCCA CCGCTCCTCG ACCCGTTCCA TGA
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| Protein sequence | MPTVIATVAC LLSTSALTRL FEGVLWWFGP VLVATTVAVG TGVASRLLRL PAAAEILLSL
VGLIGTVTVL SARSTALLGF LPTATTVETL HTLISAGGSD ISRLAAPVPA RPGLVVLTVI
GVYLLVMIVD LIVVKFDHPT LGGLPLLALY AVSAAILPGG VGVVPFLLGA VSFIALLLLD
GRLAYERWGR TVSDQRRAGV EMFGGRIAVG ALGVAVTALV AAIVVPLGLP SLDGEGLVSR
KGGSGAGDGP SSASVVQPIV SVSQQLHAST EVPLLRLRSD EPKYLRLTAL ENFDGQLFTL
RALNATREDR VSEGLPKPRT GGATQSVRAE VAVTGRFNEL YLPVPGIPIR IEGLTGDWRL
ASPTGTIFST RTSTANAHYQ VDAVVPNPTS AQLQAATGPI PDSLGVATAL PDNLDPQLRQ
LTKAVTAGAR TPYEKVYAIQ EYLRGPQFTY DLRGAPTTQE GALSQFLFDT HRGYCEQFAS
AMTVMVRILG LPARVAIGFV PGERQSDGSY VITNRQAHAW PEVWFPSIGW ISFEPTRRSD
GTTSAPSYAP AGPEDPDNDA ALPEEQAQAE PQAVPEPVPV PDTSTPAPGD DPTAMGAARS
GDDASTSTEI PSWVVWLCAA LPVLGLLAVP AIIRIRRRRV RLRPAEDDPP DPSGATVERV
HDAWAELLDV AADLGIMIRP NDSPRAGVAR LTAYLDAEPT TAQAPGSGPE PSAWQSGGSE
PPTTYPQARA ALARLASAEE RARYAPPEMA APPSVADLSE DVVLATTTLL ALAPRARRML
ARIAPASVLR RAAPASARGR SRMGRGGGKD DGPATPTTVQ NEDNQDNQDW LDAVRDGPPS
AAATAPRPVP
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