Gene Francci3_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1395 
Symbol 
ID3903376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1676431 
End bp1677210 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content72% 
IMG OID637878732 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_480501 
Protein GI86740101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.22834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000414904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTTAC GTAGCAGTAA TTCCCATCGC CGAGCGGTGC CGGCGGGCGG CGAGTTATCG 
TCGAGCGACG TGATGGTGCG CCCCAGCCTC CTGGCTCGCC GGACCCGACT CGTGGGGCCA
GGTCGGCGAT CCGGGCGCGG ACAGGAGGCG ACGCCGGTGA CCGACGTGGA CGTGAGGGTG
GTCCGCTGGT CCCCGAGCCG GATGCGCACC CGGCTCGACG ATGTCATCGC GGTCTACAAG
GCCGCTTTCC TCGATCACCA CGAGCCTGAC CCGCAGCGGG CCGCCCGGGA CCGGGCCGCC
CATGCGCGCC GGCACTTCGA GCGGCGGGAC CTTCGTGCCG TGGCGGCCGT CACACCCGAC
GACGAACTCA TCGGGATCAC CTACGCCCTG CCCGGCCGGG TCGGCCAGTG GTGGCACGAC
GTCGTCGCCG GCGCGCTCCC GCCGGACTCG GCCGCGTACT GGCTCGACGA CTGTCTCGAG
ATCGTGGAGC TGCACGTCCT GCCCGCCTAC CAGGGCCGGG CGATCGGGCG CACCATACTG
CGGGAGCTGC TGCGCGGGGC CCCGCAACGC ACGGCCGCGC TGTCCGCCCT CGAACCCCCG
GGCAGTCCGG CGCGCCGGTT GTACGATCAT GAGGGATTCG TTCCATTGTT GTCCGACTTC
CAGTTCCCCG GGACCCTCAC CCCCTACGCC GTGCTCGGCA AGGAGCTCCG CGGACGCTCC
CCCGCCCGTC CCGACGCTGC CTCCGCCCAA GGAGCCGACC GGCACGCACC GGTACGATGA
 
Protein sequence
MTLRSSNSHR RAVPAGGELS SSDVMVRPSL LARRTRLVGP GRRSGRGQEA TPVTDVDVRV 
VRWSPSRMRT RLDDVIAVYK AAFLDHHEPD PQRAARDRAA HARRHFERRD LRAVAAVTPD
DELIGITYAL PGRVGQWWHD VVAGALPPDS AAYWLDDCLE IVELHVLPAY QGRAIGRTIL
RELLRGAPQR TAALSALEPP GSPARRLYDH EGFVPLLSDF QFPGTLTPYA VLGKELRGRS
PARPDAASAQ GADRHAPVR