| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1384 |
|---|
| Symbol | |
|---|
| ID | 3903365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1663463 |
|---|
| End bp | 1664422 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878721 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_480490 |
|---|
| Protein GI | 86740090 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.410804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00717595 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTTCC TGGCCGGGCA CTGGCTGTGG CTGTACCTGG GGGTCGGCGC GTTGCTGATC
TCCTATGTCG TGGTCTCGGC GCGGCGGCGG GTGTATGCCG CCCGGCTGTC GTCGACGTCG
CTGCTGTCCT CGGTGCTTCC CCGCCGACCG CAGTGGTGGC GCCGTCACGT CCCGGCGGCG
CTGCTGCTGC TCGCCCTCGC CGGGTTGGTG TTCTCCCTGG CGCGACCGGC GCGGGCCGAG
CGGGTTCCCC GGGAACGCGC GACGATCATC CTGGCGATCG ACGTCTCCAA CTCGATGGCG
GCCACGGACA TCGCCCCGAC CCGGCTGGCG GCCGCCAAGC AGGGCGCCTC GGCATTCGTC
GACCAGCTCC CTCCCCGTAT CAACCTCGGG CTGGTCTCGT TCGCCGGCAG CGCGACGGTC
CTGGTGCCCG CGTCCGCCGA CCGCGAGTCG GTCCGCGCCG GCATCCGCGG CCTGCAGCTC
GGTCCCGCGA CCGCCGTCGG CGAAGGAATC TTCGCCTCGC TCCAGGCGAT CACCACCGCC
GGCAAACGGT TCTCCGACAC GGGGCAGAGC GCGCCTCCGG CCGCCATCGT GCTGCTCTCC
GACGGGGAGA CCACCCGTGG GCGGCCGAAC AACCAGGCGA TCGAGGCGGC GCGGCAAGCC
CGTATCCCGG TGGACACCAT CGCCTACGGC ACCGCCGACG GAACGCTCGA CGTCGGCGGC
CAGGAGGTGC CGGTGCCGGT CAACGAACAG GCGCTCCGTG ACATCGCGGA GCAGACCGGC
GGCTCGTACC ATCGTGCCAC CTCCGGCGAC GAACTGCGTT CGGTCTACCG GGGGCTCGGT
AGCTCGATCG GCTACCGGAC CGAATACCGG GAGGTCACCA CCTGGTTCCT CGGGCTGTCC
CTGGGGCTGG GATTCGCCGC GGCGGCGACG TCCCTGGCGT TCACGTCCCG GCTTCCCTGA
|
|---|
| Protein sequence | MSFLAGHWLW LYLGVGALLI SYVVVSARRR VYAARLSSTS LLSSVLPRRP QWWRRHVPAA
LLLLALAGLV FSLARPARAE RVPRERATII LAIDVSNSMA ATDIAPTRLA AAKQGASAFV
DQLPPRINLG LVSFAGSATV LVPASADRES VRAGIRGLQL GPATAVGEGI FASLQAITTA
GKRFSDTGQS APPAAIVLLS DGETTRGRPN NQAIEAARQA RIPVDTIAYG TADGTLDVGG
QEVPVPVNEQ ALRDIAEQTG GSYHRATSGD ELRSVYRGLG SSIGYRTEYR EVTTWFLGLS
LGLGFAAAAT SLAFTSRLP
|
|---|
| |