| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1379 |
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| Symbol | |
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| ID | 3906581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1656509 |
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| End bp | 1658032 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878716 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_480485 |
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| Protein GI | 86740085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.464445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0167147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCA CGACCGGTCC TTCGGCAGTT CCCCGCGCAC CGGTGGCCTC CGCGCCAACA
CCTGAGGTAT CCGGTGGTGA CAGGACGCCC ACCACCCGCA CACCCAACAC CCGCACACCC
AACACCCGGC TGCGACTGAG TCGGGAGGAA CGGGGCTGGT CGCAGGAACG GCTCGCCACC
GAGATCCGTC GGTTCTCCGT CATCCACGAG GGTCGCGAGG CCGGGGTGAC CGGCAACATG
ATCTGCAAGT GGGAGAAGGG CGACAAGAAA CCAAGCCTGC GTTATCAGCG GTTGTTGCGG
GCGCTATTCG GCCGGTCGTC GGCGGAGCTC GGTTTCGTGG ATGACGAAGC GCTTCCCGCC
GCCGTCGGAG CACTGCGGGG CGGAACCGGT CAGGGTACGG CCGTCGCCGC GTCGATGAAC
CTTGAACAGG CGGCCTGCGA GACGGGCGCC GCGGGCACAC TCGTACTTCA CCCCGGCACC
GACATGATCG ACACGAACGG TATTCCCGTG GAACGTCGGG ACTTTCTCCG GCTCTTCGCC
GCGGCGGGCG GCGTCGCCGT CGTGCCCATG AACGGCGTCA CGGACACCCC GCCCTGGGAG
CGCCTCTCGG CGGCGCTGCG TCGCCGTAGC ACGGTGACCC CGGAGCTCGT CAACGAGCTG
GGCCAGCTCA CCGCGGGGCT GTACGGCTTA GAGGAACGCG TTCCCGCCCG GATCCTGATA
CAGCGGGTCA CCGGGCATCT GAGCAGGCTC AGTCAGCTGC TGGAGACCAC GAGCCGGTCC
CCGGTGCGCC GTGAGCTGAC CTCCACCGCC GGGGAGACGG CGGCGCTCGC CGGATGGCTC
TCGTTCGACA TGAACGACCT GCCCGCGGCC GTCGCCTACT ACCGGGTGGC CATCGAGGCC
GCCCGCGAGG CCGATGACCA CGCCCTGTGG GCCTGCGTAC TCGGTTACGA GAGCTACCAG
ACCGCCAGCC GTGGCCGCCA CGACCAGGCC TGCGCGCTGC TCGGTGAAGC CCAGCGGCGA
GCCGCCACGG GCAGCACGGT GATGACCAGG GCCTGGCTGG CTGCCCGGGA GGCCGAGGAG
CAGGCCGCTC GCGGCGAGGG CCGGGCGGCG CTGGCCGCCC TCGACCGTGC CCAGGATGCC
TTCGACCGGG GTGAGAGCGA CGGGGACCGG GTCTGGACGC AGTTCTTCGA CCGGGGCCGG
CTCGATGGCC TGAAGGTCAC CACCTACACG CGGCTACGGC GACCCGCCGC GGCCTACGCC
GCCGCCACCG AGGCACTGCG GGCGGCCGCT CCCGGTGCGA CGAAGAAGCG GTCGTTGCTG
ATGAGCGACA TCGCGGAGGT GCACATCCAG CGGCGGGAGA TCGAGGCGGC CTGCCACTTC
GCGGCCGAGT CCCTCGCGAT CGTGCTCCAG ACGGACTTCT CGCTGGGCCT GGCCCGTATC
CGCCGCGCCC GGGAGCACCT GCGGCCCTGG CAGCACACCC AGGCCGTGCG CGAGTTCGAC
GAGCAGCTGC GGGCACTCAC CTGA
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| Protein sequence | MQLTTGPSAV PRAPVASAPT PEVSGGDRTP TTRTPNTRTP NTRLRLSREE RGWSQERLAT
EIRRFSVIHE GREAGVTGNM ICKWEKGDKK PSLRYQRLLR ALFGRSSAEL GFVDDEALPA
AVGALRGGTG QGTAVAASMN LEQAACETGA AGTLVLHPGT DMIDTNGIPV ERRDFLRLFA
AAGGVAVVPM NGVTDTPPWE RLSAALRRRS TVTPELVNEL GQLTAGLYGL EERVPARILI
QRVTGHLSRL SQLLETTSRS PVRRELTSTA GETAALAGWL SFDMNDLPAA VAYYRVAIEA
AREADDHALW ACVLGYESYQ TASRGRHDQA CALLGEAQRR AATGSTVMTR AWLAAREAEE
QAARGEGRAA LAALDRAQDA FDRGESDGDR VWTQFFDRGR LDGLKVTTYT RLRRPAAAYA
AATEALRAAA PGATKKRSLL MSDIAEVHIQ RREIEAACHF AAESLAIVLQ TDFSLGLARI
RRAREHLRPW QHTQAVREFD EQLRALT
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