| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1371 |
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| Symbol | ruvB |
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| ID | 3906573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1645330 |
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| End bp | 1646376 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878708 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_480477 |
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| Protein GI | 86740077 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.386234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.148478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ACGGCCTGGT GTCCGCCGCG GCGAGTCCCG AGGAGCGCGC CTTCGAGGCC
GGGCTGCGTC CGCGCACCCT GGCCGAGTTC GTCGGCCAGC GTAAGGTGCG CGAGCAGCTC
ACAATCATGC TCGAGGGGGC GCGGGCGCGT GGTCGCCCGC CGGACCACGT CCTGCTGTCG
GGCCCGCCCG GTCTGGGCAA GACCAGCCTT GCGATGATCA TGGCGCAGGA GCTCGAGGTT
CCGTTGCGGA TGACCAGTGG GCCGGCGATC GAACGCGCCG GGGATCTCGT CGCGATCCTC
ACTGCCCTCT CCCCGGGAGA GGTCCTGTTC CTCGACGAGA TTCACCGGAT CGCCCGGCCA
GCCGAGGAAC TGCTCTACGC CGCGATGGAG GACTTCCGGG TTGACGTCAT CCTGGGCAAG
GGCCCGGGCG CGACCGCGAT CCCCCTCGAC GTGTCGCCAT TCACGCTGGT CGGGGCTACC
ACCCGGTCGG GCCTGCTGAC CGGCCCGCTG CGGGATCGGT TCGGGTTCAC CGCCCATCTG
GACTTCTACG ACGCCGACGA GCTCGCCCGG GTGCTGACTC GCTCGGCCGG CCTGCTGGGG
GTCACCCTCA CCGCCGAGGG AGCCGCCGAG GTCGCTGGCC GGTCGCGTGG TACGCCCCGC
ATCGCCAACC GGTTGCTGCG CCGGGTGCGC GACTACGCGG AGGTGCGGGC CGACGGCGTG
GTCACCCGCG AGATCGCCCA GGCGGCGCTG CGGATCTACG ACGTCGACGG GCTCGGACTG
GACCGTCTCG ACCGGGCCGT GCTGGAGGCG CTGGTCACCC GGTTCGGCGG CGGTCCGGTC
GGGCTCACCA CGCTCGCCGT GTCGGTCGGG GAGGAACCGG AGACGGTGGA GGACGTGGCC
GAGCCGTTCC TGCTGCGTGC CGGCCTGCTG ATCCGTACCG CCCGGGGCCG GATGGCCACT
CCCGCCGCCT TCGAGCACCT CGGTCTGGAC CCCGTCACCG ATCCGCTCGG TCGTACCCAG
GTCTCGCTGT TCACCGAGGG AGAATGA
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| Protein sequence | MSDDGLVSAA ASPEERAFEA GLRPRTLAEF VGQRKVREQL TIMLEGARAR GRPPDHVLLS
GPPGLGKTSL AMIMAQELEV PLRMTSGPAI ERAGDLVAIL TALSPGEVLF LDEIHRIARP
AEELLYAAME DFRVDVILGK GPGATAIPLD VSPFTLVGAT TRSGLLTGPL RDRFGFTAHL
DFYDADELAR VLTRSAGLLG VTLTAEGAAE VAGRSRGTPR IANRLLRRVR DYAEVRADGV
VTREIAQAAL RIYDVDGLGL DRLDRAVLEA LVTRFGGGPV GLTTLAVSVG EEPETVEDVA
EPFLLRAGLL IRTARGRMAT PAAFEHLGLD PVTDPLGRTQ VSLFTEGE
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