| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1350 |
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| Symbol | |
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| ID | 3906563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1622543 |
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| End bp | 1624873 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878683 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_480456 |
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| Protein GI | 86740056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAC CCCGGCCCGC GAATACCGTT CGGCCCGTAG GCTTCGGTCG TATGTCACAG
GTATGGCCCG GCAGCCCCTA TCCCCTGGGC GCCACATACG ACGGATCGGG CACAAATTTC
GCGATCTTCT CCGAGGTCGC CGACCGGGTC CAGCTGTGCC TGTTCGACGA CGCGGGCAAC
GAGGAGCGGA TCGACCTGCG GGAACGGGAC GCCTTCGTCT GGCACGCCTA CCTTCCCACC
GTGGGACCGG GCCAGCGCTA CGGCTATCGG GTCCACGGGT CCTACGACCC CGCCCGAGGG
CTGCGCTGCA ACTCCACCAA GCTCCTCCTC GACCCGTACG CGAAGGCGGT CGACGGGGAG
GTCGCCTGGG ACCAGGCGGT GTTCCCCTAC ACCTTCGGCG ACCCCGACAG CGTCAACGAC
GCCGACTCCG GCCCCCACAT GATGAAGTCG GTGGTAATCA GCCCGTTCTT CGACTGGAAC
GGGGACCGCC CGCCACGCCG GCCCTACAAC GAGTCGGTGA TCTACGAGGC GCATGTCCGG
GGGCTGACCA AGAACCATCC CGGCCTGCCG GAGGAGTACC GCGGGACCTA CGCGGGAGTC
GCCCACCCGG TGATGATCGA CCACTATCGC AAGCTCGGCG TGACCGCGAT CGAGCTGCTG
CCGGTGCACC AGTTCGTCCA TGACGAGCAT CTGGTCAGCC GCGGGCTGCG CAACTACTGG
GGCTACAACT CCATCGCGTT CCTGGCGCCG CACAGCGGCT ACTCCGCCTC CGGCGGCCAC
GGCCGCCAGG TGCAGGAGTT CAAGGGAATG GTCAAGAACC TGCACGAGGC CGGAATCGAG
GTGATCCTCG ACGTCGTCTA CAACCACACC GCCGAGGGCA ACCACATGGG TCCGATGCTG
TGCTTCCGCG GCATCGACAA CAGCGCCTAC TACCGGCTCG TGGACAACCG TCCCCAGTAC
TACATGGACT ACACGGGCAC CGGCAACAGC CTGCGGGTAC GACACCCGCA CGTGCTACAA
CTGATCATGG ACTCGCTGCG TTACTGGGTC ACCGACATGC ACGTGGACGG GTTCCGGTTC
GATCTCGCGG CGACCCTGGC CCGGGAGTTC TACGACGTCG ACCGGCTGTC ATCGTTCTTC
GACCTCGTCC AGCAGGATCC GGTGGTCTCC CAGGTCAAGC TGATCGCGGA ACCGTGGGAC
CTCGGCGAGG GCGGTTACCA GGTGGGGAAC TTCCCCCCGC TGTGGACCGA GTGGAACGGT
AAATACCGCG ACACCGTCCG CGGCTTCTGG CGCGGGCAGG ACCACGGGAT CGCCGAGTTC
GCCTCCCGGC TGACCGGATC GAGCGACCTG TACGAGAACA GCGGGCGCCG GCCGTGGGCA
TCGATCAACT TCATCACCGC GCACGACGGG TTCACCCTGC ACGACCTGGT CTCCTACAAC
GAAAAACACA ACGAAGCCAA CGGCGAGGAC AATCGGGATG GCTCCGACGA CAACCGGTCG
TGGAACTGCG GAGTCGAAGG GCCCACCGAC GACCCGACCG TCCTGTCCCT GCGCGCCGCG
CAGACCCGTA ACCTGCTGAC GACGCTGTTG CTGTCCCAGG GGGTGCCGAT GCTGGTCGCC
GGAGACGAGA TGGGACGCAC CCAGCAGGGC AACAACAACG CGTACTGCCA GGACAACCCG
ATCTCCTGGC TGGACTGGTC CGACGCCGAG CGCAACGCCG ACCTGATCGA GTTCACCGGC
ATGCTGTCAA GGCTGCGCCA TGATCATCCG ATCTTCCGCC GCCGCCGGTT CTTCCAGGGC
AAGTCGCTGC GCGGGCAGGG CGGCACGACG CACGGCGCGG CCGAGGCGGT CACCGGCGGG
CAGGCGGGCG GCCAGGACGC GGACGGCAGT GGCGGGCGCT CCGGCGACGA CCCCGCCGTC
AAGGACGACC CCGCCGTCAA GGACATCGCC TGGCTCCGCC CGGACGGCAC GGAGATGTCC
GACAGCGACT GGGAGTCCGG GACGGCGCGA TCACTCGGCG TCTACCTCAA CGGTGAGGGG
ATACCGGACC CCGACGCGCT GGGCCAGGCC ATCATCGACG ACTCGTTCCT GCTGTTCTTC
AATGCCCACC ATGAACCGGT CGGGTTCCAG GCGCCGGCGA CCAGTTTCGG CAGTTCGTGG
GAGATCGTCG TCGACACCCG GGCGTCGACG GCCGAGGTCG ACGCCCGGCT CAGCGACACC
GCGCTGCTCC ACTCGGCCCT CGATCCCGCG AGCATGGGAA GGGCCGTGAA GGCCGGCGAT
CCCATCGAAC TCGACGCCCG CTCGACCGTC GTGCTGCGCC GTGTCAGCTG A
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| Protein sequence | MKRPRPANTV RPVGFGRMSQ VWPGSPYPLG ATYDGSGTNF AIFSEVADRV QLCLFDDAGN
EERIDLRERD AFVWHAYLPT VGPGQRYGYR VHGSYDPARG LRCNSTKLLL DPYAKAVDGE
VAWDQAVFPY TFGDPDSVND ADSGPHMMKS VVISPFFDWN GDRPPRRPYN ESVIYEAHVR
GLTKNHPGLP EEYRGTYAGV AHPVMIDHYR KLGVTAIELL PVHQFVHDEH LVSRGLRNYW
GYNSIAFLAP HSGYSASGGH GRQVQEFKGM VKNLHEAGIE VILDVVYNHT AEGNHMGPML
CFRGIDNSAY YRLVDNRPQY YMDYTGTGNS LRVRHPHVLQ LIMDSLRYWV TDMHVDGFRF
DLAATLAREF YDVDRLSSFF DLVQQDPVVS QVKLIAEPWD LGEGGYQVGN FPPLWTEWNG
KYRDTVRGFW RGQDHGIAEF ASRLTGSSDL YENSGRRPWA SINFITAHDG FTLHDLVSYN
EKHNEANGED NRDGSDDNRS WNCGVEGPTD DPTVLSLRAA QTRNLLTTLL LSQGVPMLVA
GDEMGRTQQG NNNAYCQDNP ISWLDWSDAE RNADLIEFTG MLSRLRHDHP IFRRRRFFQG
KSLRGQGGTT HGAAEAVTGG QAGGQDADGS GGRSGDDPAV KDDPAVKDIA WLRPDGTEMS
DSDWESGTAR SLGVYLNGEG IPDPDALGQA IIDDSFLLFF NAHHEPVGFQ APATSFGSSW
EIVVDTRAST AEVDARLSDT ALLHSALDPA SMGRAVKAGD PIELDARSTV VLRRVS
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