| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1334 |
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| Symbol | hemE |
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| ID | 3906547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1601250 |
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| End bp | 1602359 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878667 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_480440 |
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| Protein GI | 86740040 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0406905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCC TCCACGTTGA CGCGCGACCC GGATCCGGGC CGGGTGGCGT CTCGCCCCCG
CCGAGCGGTG CAGCGCTCGC CCGGCGGCCC GGCCTGGCCG ACACCGCGCC CTTCCTGCGT
GCCTGTCGAC GGGAGCACCC CGGGACCACG CCGGTGTGGT TCATGCGTCA GGCCGGGCGG
GTCCTGCCCG AGTACCGGGC CCTGCGCGCG GGAGTCGCCA TGCTCGACTC CTGCCGGGAC
GCCGAGATGA TCACGGAGAT CACGCTCCAG CCGGTACGCC GGTTCCGGCC GGACGCGGCG
ATCTTCTTCT CCGACATCGT GGTGCCCCTG GTCGCGATCG GCCTCGACAT CGACATCGTC
GCCGGGATCG GACCGGTGGT GGCCGAGCCC GTGCGGGACG CCGTCGGGCT CGCCGCGTTG
CGTGCACTGG AGCCGGACGA CGTTCCCTAC GTGGCCGACG CGGTCCGGTT CCTGCTGGCC
GAGCTGGGTT CAACCCCGCT GATCGGGTTC GCCGGGGCGC CGTTCACCCT CGCGAGCTAC
CTCATCGAGG GCGGACCGAG TCGCGACCAC GCCCGCACCA AGGCGTTGAT GTACAGCGAA
CCGAAGCTCT GGCACGCCCT GCTGGCCCGG CTCGCCGACA TCACCACCGC CTTCCTGCGC
GTCCAGGTGG ATGCCGGTGT TGACGCGCTG CAGCTGTTCG ACTCCTGGGC CGGGGCGCTG
GACGAGGCGG ACTACCGTCG CTACGTCGCG CCGCACAGCG CTCGGGTGCT GGCGGCCTTC
GCCGGTGAGG TGCCGCGCAT CCACTTCGGT GTGAACACCG GTGAGCTGCT CGCCGCGATG
GGCCAGGCGG GTGCGGACGT CGTCGGCGTC GACTGGCGGG TCCCTCTCGA CGAGGCCGCC
CGGCGGATCG GGCCCGGTCA TGCCGTGCAG GGAAACCTCG ACCCGACCGC GGTCTTCGCC
CCCGAACCGG TGCTCGCCGC CAAGGTGCGC GACGTCTGCG CCCGCGGGGC CGAGGCAGAG
GGGCACGTGT TCAACCTCGG CCACGGGGTG CTGCCGCAGA CCGATCCGGG CGTGCTCGCG
CACGTCGCCG ACCTTGTCCA CGGCGGATGA
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| Protein sequence | MPVLHVDARP GSGPGGVSPP PSGAALARRP GLADTAPFLR ACRREHPGTT PVWFMRQAGR
VLPEYRALRA GVAMLDSCRD AEMITEITLQ PVRRFRPDAA IFFSDIVVPL VAIGLDIDIV
AGIGPVVAEP VRDAVGLAAL RALEPDDVPY VADAVRFLLA ELGSTPLIGF AGAPFTLASY
LIEGGPSRDH ARTKALMYSE PKLWHALLAR LADITTAFLR VQVDAGVDAL QLFDSWAGAL
DEADYRRYVA PHSARVLAAF AGEVPRIHFG VNTGELLAAM GQAGADVVGV DWRVPLDEAA
RRIGPGHAVQ GNLDPTAVFA PEPVLAAKVR DVCARGAEAE GHVFNLGHGV LPQTDPGVLA
HVADLVHGG
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