| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1325 |
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| Symbol | |
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| ID | 3906597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1588227 |
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| End bp | 1589693 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637878658 |
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| Product | deoxyribonuclease/Rho related TRAM |
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| Protein accession | YP_480431 |
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| Protein GI | 86740031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.367718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.30892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCGAC AGCGTCGGCC CGCGCGATCG CGCGTCTTCG GGGGCACCGC ACGGCAGGCC
CGCGTGCCGG GGATCGCGGT CGGCTCGCTG CTCGACCTCG ACGTCGGGCC GGTGGCCCAC
GGCGGCTTCT GCGTCGCCCG CTCGGGCGGT CGGGTGGTGT TCGTCCGCCA TGCCCTGCCC
GGCGAACGGA TTCGTGCCCG AGTTACCGAC GCCTCCCACG AGCGGTACTG GCGGGCGGAC
GCGGTCGCCG TCCTGACGCC CTCGCCGGAC CGGGTGGTCG CGCCCTGCCC GCACGCCGGT
CCAGGGTTGT GCGGGGGGTG CGACTGGCAG CATGCCGGCC TCGCGGCGCA GCGGCGCGGT
AAGGCCGAGG TCGTGGCCGA CGCCCTTCGG CGGTTCGGCG GCCTCGACGC CCGGGTCAGC
CCCGCGCACG CCGGGTCCGG CCTAGGGACG GCGGCCGAGG CCGGACCCGG CGCCGAGCCG
GCGCTGGAGG TGCTGGTCGA GGCGGTGCCC GTCGGCGGTC CGGAGCGGCT GACCGGATCC
GACCGGCCCG GTGGCGCCGA CGACGGACTG GCGTGGCGGA CCCGGATGCG CTTCGCGGTG
ACGGCCGGCG GCGAGGTCGG GCTGCGGGCG AGCCGCTCGC ACGAGGTGGT GGCGACGCCG
GACTGCCGCA TCGCCCACCC CCTCGTCCTC GCGGCGCTCG CCGGCCGGCG GTTTCCTGGG
GCCGACGCCG TCGAGGTCGC GGCCAGCCCG GCGACCGGGC AGGTGGCCGT GGCGGTGCAT
CCCGCCGGTG CCGGGACGGT CGTCAACGAC GAGCACGCCG GGACCGGCGA GGATCCCGGG
GAGGTCGGAG CCCCCGGGGA GGTCGTCGAG GTGGTGGGGG GGCGGAGGTT CCGGCTCGGG
CCGGAGGTGT TCTGGCAGGT CCATCCGGCG GCTCCCGGCG TGCTGGTGGA CGCGGTCCGC
GAGGCCCTGC GTCCCCGAGC CGGGGAGACC GCGCTCGACC TGTATGCCGG GACGGGCCTG
TTCGCGGCGT TCCTCGCGGA GGATGTCGGC GCCGCTGGCC GCGTCATCGC GCTGGAGTCC
GACGCCGCGT CGGTCGCGGC CGCGGCGAAC AACCTCGCCG ATCTGCCATG GGTCTCGCTG
CGGGCGTTGC GGGTGACGCC GGCTACCGTT CGTGGGGTGG TCGGTACGGG CGGGCCGGCC
GGCCGGGTCG ATCTCGCGGT GCTCGACCCG CCGCGCACCG GGGCGGGCCC GGCGGTGGTG
GCCGCGCTGC TCGCCCATCG CCCCCGCGCG GTCGCCTACG TCGCCTGCGA TCCTGTCGCG
CTGGGTCGGG ACCTCGCCGC CGCGGCGGCC GCGGGCTACG ACCTCGTCGT GTTGCGCGCC
TTCGACCTGT TTCCGATGAC CGCCCACGTC GAGTGCGTGG CACTGCTCGA GCCGCGCGGC
GCGGACCGGA ATCCGAACCT GGTGTGA
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| Protein sequence | MSRQRRPARS RVFGGTARQA RVPGIAVGSL LDLDVGPVAH GGFCVARSGG RVVFVRHALP
GERIRARVTD ASHERYWRAD AVAVLTPSPD RVVAPCPHAG PGLCGGCDWQ HAGLAAQRRG
KAEVVADALR RFGGLDARVS PAHAGSGLGT AAEAGPGAEP ALEVLVEAVP VGGPERLTGS
DRPGGADDGL AWRTRMRFAV TAGGEVGLRA SRSHEVVATP DCRIAHPLVL AALAGRRFPG
ADAVEVAASP ATGQVAVAVH PAGAGTVVND EHAGTGEDPG EVGAPGEVVE VVGGRRFRLG
PEVFWQVHPA APGVLVDAVR EALRPRAGET ALDLYAGTGL FAAFLAEDVG AAGRVIALES
DAASVAAAAN NLADLPWVSL RALRVTPATV RGVVGTGGPA GRVDLAVLDP PRTGAGPAVV
AALLAHRPRA VAYVACDPVA LGRDLAAAAA AGYDLVVLRA FDLFPMTAHV ECVALLEPRG
ADRNPNLV
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