Gene Francci3_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1286 
Symbol 
ID3905091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1537439 
End bp1538317 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID637878620 
Productglycosyltransferases-like 
Protein accessionYP_480393 
Protein GI86739993 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG TGGCGGTGAT TGTCCACTGG GGTCCGCACC GGCCGACCGT GGAGCTTGCG 
AGATGGCTCG ACGGCAGCCC CGTCATCGCC CAGGTGGCGG TGGTCGCGAA CGACCGGTCG
GACCGACCCG ACCACCTGCC GGCCTCGGTC GCCTGGATCC TGCCGCCCCG CGACCTCGGT
CTCGGCGGAG GCTTCCGGCT CGCCAGCCAC GGCTACCCCG CCGCGCAGGC CTATCTCCTG
ATAGGCAACC ACGTCAGGAT CCCGGACCTG GCGCTGCGCG CCTGCCTGGA TCTGCTGGCC
GGGACGAACA TCGGCGTGGT CGCGCCCACA CTGGTCGACA ACGACGGTCG GCGCTCGGGC
CCGGCGCGGC TAAGCCCGGT CCTGGCTGCG CCGAAGGCCC GGCGTCCCCC CGGCGACCGC
CCCCTGGAGG CCGACTGGGT CGCAGGCACG ATCATGTTCG TCAAGGCGGA CTGCCTGCGG
CGGATCCCCC TGGACGGCCG TTACTACCTC GGGTTCGAGG ATGTCGACTT CTGTTACCGC
GTCCGGGACG CCGGATGGAG CGTCGTGGTC AGTCCGCACC GTGCACAGCG CATCGGGAGC
ACGACCGTCC CCCGGCATGG CGACGCCTAC TACGGGGTGC GCAACCGGCT CTGGTTCGCC
CGGGTCCGCG GATGGCGAGC CCGGGCCGCC TTGATCGCTC TGGCGACGGC GGTCGTCGTG
CTACCCCGCG CCGTCGCGCT GGACATGCTC CTCGGGCACG GCACCCGGAC CTCGGCCCTC
GTCCTCCACG GCCTGCTGGA CGGTCTCTCG ATGCTTCCCC CGCCGGGAGA GGCACGTGAC
GACGAGCCGC GCGCCGCTCA CTGGACAAGC TGGCCGTAG
 
Protein sequence
MKTVAVIVHW GPHRPTVELA RWLDGSPVIA QVAVVANDRS DRPDHLPASV AWILPPRDLG 
LGGGFRLASH GYPAAQAYLL IGNHVRIPDL ALRACLDLLA GTNIGVVAPT LVDNDGRRSG
PARLSPVLAA PKARRPPGDR PLEADWVAGT IMFVKADCLR RIPLDGRYYL GFEDVDFCYR
VRDAGWSVVV SPHRAQRIGS TTVPRHGDAY YGVRNRLWFA RVRGWRARAA LIALATAVVV
LPRAVALDML LGHGTRTSAL VLHGLLDGLS MLPPPGEARD DEPRAAHWTS WP