Gene Francci3_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1279 
Symbol 
ID3905084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1529591 
End bp1530130 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID637878613 
Producthypothetical protein 
Protein accessionYP_480386 
Protein GI86739986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.960366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGAC TCCAGCTTCC GGACCTGGCT CAGCGCGACA CCAAGTACCT CGCATCCCAG 
GAACGCCTGG TGATGATGGT GCGGTTGCAC TGGGCGGTCC TGCTGCCCAT CTTCCTGCAG
ACCGTCGGGG CCGTACTGCT CGCGCTCGTG GCGAACATCC TGTTCGCCTC GCAGGACGTC
GACGCCGGCA TCATCACCAC GCTGCTGTGG TACTTCGCCC TCTTCATGAT CTTGAGGATG
CTGTGGAGGG TCGCCGACTG GCAGTTCGAG CACCTTATGA TCACCGACAA ACGGCTCCTG
AAGGTGTCCG GGATCTTTTT CCGCAAGGTC CAGACGATGC CACTTTCCAA GATCACGGAT
CTCACGTACA ACCGGGATCC GCTTGGCCGG TTGCTCGGGT ACGGCGAGTT CGTCGTGGAG
TCCGCCGGCC AGGACCAGGC GCTTTCCAAG ATCCAGTTCC TGCCGCGTCC AGACCGGCTC
TACCTCACCC TGGTCGACAT GACCTTCGGT GGAGCACCCG CCCCAGCCGG AGACGACTGA
 
Protein sequence
MVRLQLPDLA QRDTKYLASQ ERLVMMVRLH WAVLLPIFLQ TVGAVLLALV ANILFASQDV 
DAGIITTLLW YFALFMILRM LWRVADWQFE HLMITDKRLL KVSGIFFRKV QTMPLSKITD
LTYNRDPLGR LLGYGEFVVE SAGQDQALSK IQFLPRPDRL YLTLVDMTFG GAPAPAGDD