| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1273 |
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| Symbol | |
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| ID | 3906119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1519106 |
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| End bp | 1519903 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637878607 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_480380 |
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| Protein GI | 86739980 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.519707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.154867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCTGC GTAATGGTGT GAAGACGCGG TTTCGCGATC CGCATCCCCA TCCCTCCGGC
GCGCGACCTC CGGTCCTGCC GTCGCGTCTC GTCCCGCGGC ATGTGGGCAT CGTCATGGAC
GGCAACGGAC GGTGGGCGAA GATGCGCGGG CTGGCGCGAA CAAAAGGACA CGAGGCCGGC
GAGGACGCCC TGTTCGACTG CGTCGAGGGC GCGATCGAGC TCGGGGTCCG ATGGTTGTCG
GTGTTCGCTT TCTCCACGGA GAACTGGAAA CGGTCACCGG ACGAGGTGGC GTTCCTGATG
CGCTTCACCG ACGGGGTGTT CGGCCGGCGC ATCGAGGACA TGCACGCGCT CGGTGTGCGG
GTTCGCTGGG CGGGTCGTCG TCCCCGGCTG TGGGGGAACG TGATCAGGCG GCTGGAGTCG
TCCGAGGAAC GTACCCGTGA CAACGACCGG CTCACCTTGG TGATGTGCGT GAACTACGGC
GGCCGGGCCG AGATCGCCGA TGCCGCGGCG GCGATCGCCC GGGACGTGCG GGAGGGCCGG
CTGCGCGTCG ATCGGATCGA TGAGGCGACC ATCGGCCGTT ACCTGGACGA GCCCGACATG
CCCGATCTGG ACCTCGTCAT TCGGACTTCC GGGGAGCAGA GGCTCAGCAA CTTCCTGCTC
TGGCAGGCCG CCTATGCCGA GTTCTCGTTC GTCGAGACGC TCTGGCCGGA CTTCGACCGG
CGCGATCTGT GGTCCGCCTG TGAGGACTTC GCCCGACGGG ACCGGCGCTA CGGCGGAACC
GTCGCCCATC ACGTCTGA
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| Protein sequence | MALRNGVKTR FRDPHPHPSG ARPPVLPSRL VPRHVGIVMD GNGRWAKMRG LARTKGHEAG
EDALFDCVEG AIELGVRWLS VFAFSTENWK RSPDEVAFLM RFTDGVFGRR IEDMHALGVR
VRWAGRRPRL WGNVIRRLES SEERTRDNDR LTLVMCVNYG GRAEIADAAA AIARDVREGR
LRVDRIDEAT IGRYLDEPDM PDLDLVIRTS GEQRLSNFLL WQAAYAEFSF VETLWPDFDR
RDLWSACEDF ARRDRRYGGT VAHHV
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