Gene Francci3_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1259 
Symbol 
ID3906105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1504475 
End bp1505479 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID637878593 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_480366 
Protein GI86739966 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.098932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCT GCGTGTCCTC CTCCGCACTG CCGCCGCTCG TGCTCGTCAC CGGCGACGAG 
GATCTACTCG TCGGTCGAGC GGTGCGCGGG GTTCTCGACG CGGCTCGGGC CCGTGATCCC
GATGTCGAGA TCGTCGACCG GCCGGCCGGT GAGCTCAGCG AGGCCGATCT GATCGACCTC
GGCGCCACCT CGATGTTCGG AGGTGGCCGG GTGATGGTCG TCCGCGGCGC GCAGGACCTC
GCCGAGGATC TGCGTGACGC GTTGTTGGAG TACATCGCTC GTCCGCTCGA CGACGTCGTG
CTCGTCGTCG TCCACAGCGG CGTGGTGAAG AACCGCAAAC TCGCGGACGT GCTGAAGACC
GCGGGCGCGC GGGTCGTGCC GGCAGCGAAG ATCACCAAGC CGCGGGAGCG TCACGATTTC
GTCGTCGCCG AGGTGCGGCA TCTCGGCGGC CGGGTCAGCG ACGGCGCGGT GCGCGCCCTG
CTCGACGCGG TCGGTGGTGA TCTGCGTGAG CTCGCCGCCG TTTGCGATCA ACTCGTGGCC
GACACCGACG GGCTGATCGA CGAGGCCGCG GTGGCCCGTT TCCACCGGGG CCGGGCCGAG
GCCAGCGGGT TCGCCGTCGC GGACGCGATC ATCGGCGGCG ACCTGCCGCA GGCGTTGACG
CTGCTGCGTC AGTCCCTGGA GGGGGGTACC GCGGCCGTAC TGGTCTCCAG CGCCGTTGCC
GGTGGTCTGC GTGACCTCGC CCGGGTGGCG TCCGCGGGTC CCGGCTCGAA GTGGGATCTC
GCCCGAGCCC TGGGTATGCC GGACTGGAAG GTCGAGAAGG CGCAGCGCTC CGCCCGAGCA
TGGTCGGACC GGGGTCTCGG CCAGGCCCTG CGGGCGGCCG CCGAGGCCGA CGCCGGCGTC
AAGGGCGCTG CGGTTGACGC CGGTTACGCC TTGGAGAAAC TGTTGCGCGA GGTCGCCGTG
GCCAGGTTGG TCGGGCGGGC CCGGGCGGCC GGGAGCCGTG GATGA
 
Protein sequence
MLTCVSSSAL PPLVLVTGDE DLLVGRAVRG VLDAARARDP DVEIVDRPAG ELSEADLIDL 
GATSMFGGGR VMVVRGAQDL AEDLRDALLE YIARPLDDVV LVVVHSGVVK NRKLADVLKT
AGARVVPAAK ITKPRERHDF VVAEVRHLGG RVSDGAVRAL LDAVGGDLRE LAAVCDQLVA
DTDGLIDEAA VARFHRGRAE ASGFAVADAI IGGDLPQALT LLRQSLEGGT AAVLVSSAVA
GGLRDLARVA SAGPGSKWDL ARALGMPDWK VEKAQRSARA WSDRGLGQAL RAAAEADAGV
KGAAVDAGYA LEKLLREVAV ARLVGRARAA GSRG