Gene Francci3_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1255 
Symbol 
ID3903554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1499498 
End bp1500061 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID637878589 
Producthypothetical protein 
Protein accessionYP_480362 
Protein GI86739962 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0915245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA TCTACCGGCA GCACCGACGT CAGCAAGCCC CCAGCGCGCT GTGGCCGGCG 
TTGCTCCTGC TCGGTGCGGC GGTCACCGTG CTGGGACTTC TGCTGATCAC GAACCCCTTC
GCGACAGCCC GCACGCTGGC GGTCCTCGCC GGGGTGGCAC TCGTGCTCTC CGGTATCAGC
GAGACGATCG CCGCGGTCCG GTCGGAGAAC ACTGCGGGGA CCGCCCTGTT CGGGATCATG
CTTGCGCTCG GCGGCGTCAT CGTGCTGCTG TGGCCGGGAG TCACCCTCCG AGTCGTCGCA
CTGCTCGTCG GCGCGATACT GATCATCACC GGGGTCGTCC GGGCCCTGGT GACCTGGGCG
AGCAGATCCT CGCGCGGGAC CGGCCGCGGC ATCGCCGGTC CGCTCGCCTT GGCCGCGCTC
AGTGTCGTCC TCGGCGTGCT GGCGCTGACC TGGCCGGGAA CGACGATCAT GGTACTAGCG
GTGATCTTCG GAATCCAACT GATCGTCACC GGTGTCACCG AGATCGCGCT CGGGCTCGCG
CTTCGCCCGC ACGGTCACTC CTGA
 
Protein sequence
MATIYRQHRR QQAPSALWPA LLLLGAAVTV LGLLLITNPF ATARTLAVLA GVALVLSGIS 
ETIAAVRSEN TAGTALFGIM LALGGVIVLL WPGVTLRVVA LLVGAILIIT GVVRALVTWA
SRSSRGTGRG IAGPLALAAL SVVLGVLALT WPGTTIMVLA VIFGIQLIVT GVTEIALGLA
LRPHGHS