| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1237 |
|---|
| Symbol | |
|---|
| ID | 3903536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1481837 |
|---|
| End bp | 1482355 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637878571 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_480344 |
|---|
| Protein GI | 86739944 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.774272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGC GTGTGCGGGC GCGGCGGCTG ACCGGGGAGG AAAGCCGCCA GGTGCAGGCG
ATCGTGCGGC GGGGGACGCA CTCCTCGGTC CGGGCCCGCC GGGCGACGAT CATCATGGCA
TCGGCCGGCG GGACGACGGT GCCGGCGATC GCCCGGCTGG TTGCCGCTGA CGAGGGCACG
GTCCGGGATG TGATCCACCG GTTCAACGAG ATCGGTCTGG CCTGCCTGGA CCCTCGGTGG
GCCGGAGGCC GTCCCCGCCG GATCAGCTGT GAAGACGAGG CGTTCATCAT CGCGGTGGCC
CGGACCCGTC CCACGAAACT GGGGCGGCCG TTCACGCACT GGAGCCTGCG TAAACTCGCC
GACTACCTGG GCGACAACCC CGACCGGGTC GTCACCGTCG GCCGGGAACG GCTGCGTCAG
CTCTTGGGCC ACCACCGGAT CTCCTTCCAA CGGACGAGAA CCTGGAAGGA GTTCACCGAT
CCGGACAAGG AGGGAAACTC GACCGGATCG AGTACCTGA
|
|---|
| Protein sequence | MAQRVRARRL TGEESRQVQA IVRRGTHSSV RARRATIIMA SAGGTTVPAI ARLVAADEGT
VRDVIHRFNE IGLACLDPRW AGGRPRRISC EDEAFIIAVA RTRPTKLGRP FTHWSLRKLA
DYLGDNPDRV VTVGRERLRQ LLGHHRISFQ RTRTWKEFTD PDKEGNSTGS ST
|
|---|
| |