| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1234 |
|---|
| Symbol | |
|---|
| ID | 3902979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1477942 |
|---|
| End bp | 1478640 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878567 |
|---|
| Product | phosphoglycerate mutase |
|---|
| Protein accession | YP_480341 |
|---|
| Protein GI | 86739941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.332638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCTGC TGCTCTGGCG GCACGGCAGG ACCACCTGGA ACGACGTCGG CCGCTTCCAG
GGGCACGCGG ATCCGCCCCT CGACGCCACC GGGCGTGCCC AGGTCGCCGC GGTGGCCCCG
GTCATCCAGG CGATGCGCCC GGAACTCGTC GTGTCGTCCG ACCTGCAACG TTGCCGGGAC
ACCGCGGCGG CGCTCGGCGT GCCCTTCCGC TCCGACGCGC GGCTGCGCGA GATCGATCTC
GGCGCGTGGT CCGGGCTGAC CGCTGCCGAG GCGGCCCAAC GCTTCCCCGC GGAGGATCGG
GCCTGGCGGC GCGGGGATGA CGTGCCCCGT GGCGGTGGCG AAACCTACCG GCAGGTGGCG
GAGCGGGCCG GCACGGTCTT CGACGAGGTC CGGGCCGAGG GGTTTCCGGC CGAATGGGAC
GGTCTCGTCG TGTTTGTCCT GCACGGCGGT ACTGCCCGGT CACTGATCGG TCATGTGCTC
GGCCTTCCAC CGGAGTTCTG GTGGCACTTC GGACCGCTCG CCAACTGCCG GTGGTCCGTC
CTGCGGCTCG TCGAGGGTGG GTTCCGCCTG GTCGAGCACA ACGCGGGGCC GCTGGCTGGT
AAGGTCGGGA CCGCCGGATC GGGGCTAACC GAGACGCTCC TGCCGAGCCA GGGGGCGCCG
ACAGCAGCCG ACACGGAGCC TGTACACTTG CCGAAGTAG
|
|---|
| Protein sequence | MRLLLWRHGR TTWNDVGRFQ GHADPPLDAT GRAQVAAVAP VIQAMRPELV VSSDLQRCRD
TAAALGVPFR SDARLREIDL GAWSGLTAAE AAQRFPAEDR AWRRGDDVPR GGGETYRQVA
ERAGTVFDEV RAEGFPAEWD GLVVFVLHGG TARSLIGHVL GLPPEFWWHF GPLANCRWSV
LRLVEGGFRL VEHNAGPLAG KVGTAGSGLT ETLLPSQGAP TAADTEPVHL PK
|
|---|
| |