Gene Francci3_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1223 
Symbol 
ID3902968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1462449 
End bp1463564 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content74% 
IMG OID637878556 
Productgamma-glutamyl kinase 
Protein accessionYP_480330 
Protein GI86739930 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.826884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.429771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCCGT TCGTGACCGA CGCGCGCCGG GTCGTCGTCA AGGTCGGTTC GTCCTCGCTG 
ACGACGGCCG CCGGCGGTCT GGACGTCGAC CGGCTTGAGG CGCTGGTGGC CGCGGTGCTG
CCCCGGGCCG GACAACAACT GGTGCTGGTG TCCTCCGGGG CCATCGCCGC GGGTCTCGCC
CCGCTCGGCC TGGCCCGGCG GCCGCGTGAC CTCGCCACCC AGCAGGCGGC GGCGAGCGTC
GGCCAGAGCT CGCTCGTACA CAGCTACGCG GCGGCGTTCG GACGGGCCGG TCACCAGGTC
GGCCAGGTGC TGCTGACGGC GACCGATGTG ATCCGCCGCA CCCACTACCG TAACGCCCGG
ACCGCGCTCG ACCGGCTGCT TGAGCTCGAC GTCATCCCGA TCATCAACGA GAACGACGCG
GTGGCCACCC AGGAGATCCG GGTCGGCGAC AACGACCGGC TCGCCGCGAT TGTCGCCCAT
CTCGTGTCGG CGGATCTGCT GGTGCTTCTG TCCGACGTGG ACGGCCTGTA CGACGCCAAC
CCCAGGCTGG GCCCGGCGAC CATGGTGCGC GAGGTGCGTT CGGATACCGA CCTGGACGGG
CTGACCGCCC GGGGCACGGG CACCGCCGGT GTCGGGGTCG GCGGGATGGC TACCAAGATC
GAGGCGGCCC GGATGGCGGC TTCCGGCGGC GTCACGGCGA TCATCACCTC GGCCGCGAAC
GCCGCACCGG TGCTGCGGGG GGAGGAGGTC GGCACCGTCT TCCACCCCAC CGGGTCGCGT
CGGGCCTCCC GCCTGCTCTG GCTGGCGCAC GCGACCGCAC CCGAGGGCCG GCTGCACTTG
GACTCCGGGG CGGTGGCCGC GGTGGTACGG CGGCGGGCGT CGCTGCTGCC CGCCGGGATA
ACCGGCGTGG AGGGGGACTT CGCCGCCGGG GACCCGGTGG ACCTGGTCGA CCCCGACGGG
CGGTCCGTGG CGCGGGGGCT CGTCGCCTTC GACGCGGCGG AGCTGCCCGT GATGCTCGGG
CGTTCGACGG CCGACCTCGC CATGGAACTC GGACCGTCGT ACGAACGTGA GATCGTCCAC
CGCGACGACC TCGTGCTGCT GCTGCCGGCC CGCTGA
 
Protein sequence
MRPFVTDARR VVVKVGSSSL TTAAGGLDVD RLEALVAAVL PRAGQQLVLV SSGAIAAGLA 
PLGLARRPRD LATQQAAASV GQSSLVHSYA AAFGRAGHQV GQVLLTATDV IRRTHYRNAR
TALDRLLELD VIPIINENDA VATQEIRVGD NDRLAAIVAH LVSADLLVLL SDVDGLYDAN
PRLGPATMVR EVRSDTDLDG LTARGTGTAG VGVGGMATKI EAARMAASGG VTAIITSAAN
AAPVLRGEEV GTVFHPTGSR RASRLLWLAH ATAPEGRLHL DSGAVAAVVR RRASLLPAGI
TGVEGDFAAG DPVDLVDPDG RSVARGLVAF DAAELPVMLG RSTADLAMEL GPSYEREIVH
RDDLVLLLPA R