Gene Francci3_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1180 
Symbol 
ID3905291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1411270 
End bp1412184 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID637878512 
Productexodeoxyribonuclease III 
Protein accessionYP_480288 
Protein GI86739888 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.287038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACTAC CGTCAACAGA TGTGCGGATC GCAACGTGGA ACATCAACTC TGCGAAGGCT 
CGGCAGGCCC GCCTGATCGA ATGGCTCGAC CGGGCCGAGC CGGATGTGGT GTGCCTGCAG
GAGACGAAGC TGGCGGACGA CGCCTTCCTG GAGCTGTTCG ACGAGGATCT GTTTCGCCGG
GGCTACCGGG TCGCCCATCA CGGCGACGGC CGGTGGAACG GCGTGGCGAT TCTGTCGCGG
GATACCCTCG ACGACGTCGC GCGGGGTCTT CCGGGCGATC CGGGCTTTCC CGGTCCCGAG
CCTCGCGCCA TCGCCGCGAC CTGCGGCGGC ATCCGGATCT GGTCGCTGTA CGTGCCCAAC
GGCCGGACCA TCGACGACCC TCATTACGCC TACAAGCTGG CCTGGCTCGC CGCGCTGCGC
GAGGTGGTGG CCGAGGCCAC GACCCAGGGC GCGGTGATGA CGTTGGGTGA TTTCAACATC
GCGCCAACGG ACGTTGACGT CTGGGACATC ACCCAGTTCG AGGGCGCCAC CCACGTCACC
CCGGCGGAAC GCGCGGCACT CGCGGAACTC GTCGACGCCG GGCTCATCGA TGTGCTGCGG
GCCCGCTGGC CCGACGACGT CGTCTACACC TACTGGGACT ACCGCCAGCT GTGTTTCCCG
AAGAACCTCG GGATGCGCAT CGACCTGGCT CTGGCGACCG CCGACGTGGC GGGCCGCGTG
CGCGCGGTCT GGGTGGACCG GGCGGCCCGC AAAGGTGTCG GGACGAGCGA CCACGCTCCC
GTCATCGTCG ATCTGGACAC CGCGCCGGAC GGCGACATCG GGCCGATGGT GCCGCCTCCG
TCGAGTGGCA GCTCGGCCGG ACAGTCCGCC CCGGGACGGA CCTCCTCCAC CGGCACCGGA
CCGCGCCGCC GCTGA
 
Protein sequence
MGLPSTDVRI ATWNINSAKA RQARLIEWLD RAEPDVVCLQ ETKLADDAFL ELFDEDLFRR 
GYRVAHHGDG RWNGVAILSR DTLDDVARGL PGDPGFPGPE PRAIAATCGG IRIWSLYVPN
GRTIDDPHYA YKLAWLAALR EVVAEATTQG AVMTLGDFNI APTDVDVWDI TQFEGATHVT
PAERAALAEL VDAGLIDVLR ARWPDDVVYT YWDYRQLCFP KNLGMRIDLA LATADVAGRV
RAVWVDRAAR KGVGTSDHAP VIVDLDTAPD GDIGPMVPPP SSGSSAGQSA PGRTSSTGTG
PRRR