| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1176 |
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| Symbol | |
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| ID | 3905287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1404171 |
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| End bp | 1406099 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878508 |
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| Product | stage II sporulation E |
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| Protein accession | YP_480284 |
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| Protein GI | 86739884 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.95059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAGA CGGCTGGCCT TCGGCGTGGC ATCCGGGTGC TGACGCTGCT CGCCAGCATC
TCGATCATCG TGATGCTGGT GTTGGCCGTG GTCTCCGCCC TGCGGTCACG TCATGCCGCG
ACGGAGCGGA GCAGGCATCT GGACCCGGCT GCGACCACCA CCGCGATGCT CCTGGCCGAC
TTTGTCGACC AGGAGAATGC TCTGCGTGGC TACATCATCA CCCGGGACCG GGGTTTCCTG
GTCCCCTACA ACGAGTCCGC CAGGTCCATC CCGGTCCTGA CGGCACGGCT GGACGCATTG
CTGGCCGACT TCCCTGCGCT GCGCGCACAG CACGGGGAAG TCGGCCAGGC GTACCGGGAC
TGGCGTCGCG AGGTTGTCCG GCCGGAACTG GTCGCGATGG CGAGAGGAGA CACCGCCACC
GCCCAGGATA TCGTGCGCAC CAAAGCGCGC CAGGACTTCG ACCTGCTGCG CCGCGAGGTC
GCGGAGCTCG CCGCGGCGAT CGACCGTGAG CAGGTCGAGG CGTCCGGGCG GGTGGAGAGT
GCCTCCGTGC TGCTGCTGAG CTCGCTGGCC AGCGCGATGT TTGTCATCCT CGGCTTCCTG
CTGACCATTA TGATCATCTC GCGGCGATGG CTGCTCCGCC CGATCGGAGC GTTGCAGCGA
TCCGTCAACG CGGTGGCCGC CGGTCGCTAC GACACCCGGA TCCCCTCCGT CGGCCCCAAG
GAGATCGTGG AGCTGGCCGC CGACGTCGAG ACGATGCGCG CCCAGCTGGT GCGGCTCGTC
CGCCAGAACG AGCGGTCGTG GGAGGCCCTG GCCCAGCAGG GACCCGCCGT GATCGCACTG
CGGGACGCGC TCACGCCCTC GCTCCTGCGG GCCCGCGGCC TGGTCCTGCA CGGCCGGGTC
GATCCGGCCG AGGGCGAACT TGCCGGGGAC TGGTACGACG CCTTCGAGCT GCCCGACGGG
CGGGTCGCCG TCGTGGTCGG TGACGTCTCC GGTCATGGAG CCGCGGCCGG GGTCTTCGCG
TTGCGGCTCA AGCAACTGCT CGACGCGGCT CTGTCGACGG AGATCGATCC CGGTCGGGCC
CTGGAGTGGA CGGTGGACAA CCTCGGCGAG ATCGAGGAGA TGTTCGCGAC CGCGATCATT
GCCGTCGTCG ACCCGCGGAC CGGGGACCTG TACTACGTCA ACGCCGGTCA TCCCGACGCG
CTCCTGCTGC GCCGGGCGGT GCCCGGGAAC TCCGGGAACA TGGCGTCGGC GGGCGAGTCG
CCCGTGGGCG AGGTGTGGGT GGGTGAGCTG CCCACAGGCA AGGTACCTGC GGACGCGGTG
CTTCCCGACG AGGCATCCTC ACCCCAGGTA CCCGCTCCGA CCGCTCACCT GGTCGGACCC
CGCGATCCCG CCCGGCCGGG ATGCGGCCCC GGTGACGGGG CGGGCGGATC CGTCATGGCG
GCTGCTGTTG GATCCGCGCA GGCCGTCGGA TCCGCGCAGG CCGTCGGATC GGCCTGCGGG
CCGGGGGATG GGGCGAACGG TGCCGGCCCC GGGTCCGGTC GGGTGCCGGG AGCCGGTTCC
ATCGTCGGTT CCCGGCTGGG AACGGCGCAG GTCGTTCGGC TGCCTCCGAC GGGCCCGTTG
ATGTCGAGCC TGCTCGCGGA GCCCGGGGCG TGGGGAATCC AGACGCTGCG GCTCGAACCG
GGCGACGTGC TCTTCGCCTA CACCGACGGA CTGGTGGAGG CACGTGACGA GGCCGGGCGG
CAGTTCGGGC TGCACCGGCT GATCGCCGAG ATCCTGCGCG ATCCCACGCG CACGCCGGTG
GCGCTGCTCG ACGACGCCTT CGACGCGGTT CGCCGGTACG CGCCCGGACG GCAGGGCGAC
GACCGTACGG CGATCATCCT CGCCCGTACC GCCCAGCGTG GCTCCACGAT CGCGCCCGGA
GAGTCATAG
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| Protein sequence | MGETAGLRRG IRVLTLLASI SIIVMLVLAV VSALRSRHAA TERSRHLDPA ATTTAMLLAD
FVDQENALRG YIITRDRGFL VPYNESARSI PVLTARLDAL LADFPALRAQ HGEVGQAYRD
WRREVVRPEL VAMARGDTAT AQDIVRTKAR QDFDLLRREV AELAAAIDRE QVEASGRVES
ASVLLLSSLA SAMFVILGFL LTIMIISRRW LLRPIGALQR SVNAVAAGRY DTRIPSVGPK
EIVELAADVE TMRAQLVRLV RQNERSWEAL AQQGPAVIAL RDALTPSLLR ARGLVLHGRV
DPAEGELAGD WYDAFELPDG RVAVVVGDVS GHGAAAGVFA LRLKQLLDAA LSTEIDPGRA
LEWTVDNLGE IEEMFATAII AVVDPRTGDL YYVNAGHPDA LLLRRAVPGN SGNMASAGES
PVGEVWVGEL PTGKVPADAV LPDEASSPQV PAPTAHLVGP RDPARPGCGP GDGAGGSVMA
AAVGSAQAVG SAQAVGSACG PGDGANGAGP GSGRVPGAGS IVGSRLGTAQ VVRLPPTGPL
MSSLLAEPGA WGIQTLRLEP GDVLFAYTDG LVEARDEAGR QFGLHRLIAE ILRDPTRTPV
ALLDDAFDAV RRYAPGRQGD DRTAIILART AQRGSTIAPG ES
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