| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1144 |
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| Symbol | |
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| ID | 3906623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1357810 |
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| End bp | 1359078 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878475 |
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| Product | phage integrase |
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| Protein accession | YP_480252 |
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| Protein GI | 86739852 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTA CCACCCCCGG CTCGTCGAAC GGCCGGCGCA AGGAGCGCAG GAAGCGCGCC
AACGGCCAGG GCTCCATCTA CCAGCGCGGA GACGGCCTGT GGGTCGGCGC GGCCTACGTC
CTGATGCCTG ACGGGACGAC CAAGCGGCGG CCGGTCTACG GCAAGTCGGA AGAGATCGTC
CGCGGCAAGC TCACGGAGCT TCAGGCCAAC TCGGATCAGG GCATTCCGGC GGACGCCACC
GGATGGACCG TCGAACGCTT CCTGACGGTC TGGCTCGCGC AGACGGTGAA GCCGAACCGT
CAGCCGAACA CCTATGTCAC CTATGAGAAG GCGGTTCGGC TGTACCTCAT CCCGGGGCTC
GGGAAGAAGC GGCTGAACAG GCTGAGCGGT GCGGACGTCC GGCAGTTCAT CCGGCGGACG
GAAACCACCT GCCGGTGCTG CGAAATGGGC AGGGACAAGG CGCGGCCGGA ACAGGAACGG
CGCTGCTGCG CGGTCGGCCA GTGCTGCAAC CGCCGTCCAT CGAAGCGTCA GGTTCAGGTC
GTGCATGCCG TGCTCCGCAA CGCGCTCCAG GCGGCGGTGC GCGAGGAACT GATCCGACGG
AACGTGGCGA AGCTCGTCCA GGTCTCGACC CCTCGTTACA ACGTCGACCG GGGTCTGACC
GTCGAGCAGG CACACCGGCT TCTCGATGAA GCTGCCGGCA ATCGGCTGTA TGCGCTGCTG
GTCCTGGCGC TGTTCCTCGG GATGCGCCGC GGGGAGCTGC TCGGGCTCCA GTGGTCGGAC
ATCGACACCG ACCGGGAGAC GCTGACGATT CGGCACACGC TCCAGCGGGT CGGCGGGGAG
CTGCGGCTGC TGCCGCCGAA GACGGAGGAC TCGGAGCGCA CGCTGTCGCT CCTGGGCCTG
GTGGCCGACG CACTCACCGA GCATCGCAAG CTCCAGCAGG CGGAACGGGA CGCGGCCGGC
GACCGCTGGG TGACGACGGA CCACGTCTTC ACCACGAAGA TCGGAACGGC GATCGAACCG
GACAACCTGC GCCGCTTCTG GATGCCGCTG CGTCAGGCGG CCGGGCTCGA CGGGGTCGTG
TTCCACGGGC TGCGGCACAC CTGCGTGACG CTGCTCCTGG ACCTCGGCGT GCCGCCGCAC
ATCGTCCGTG ACATCGCGGG CCACTCGGCG ATCGAGGTGA CGATGACGAT CTACGCGCAC
GCCTCGATGG GGGAGAAGCG GCGGGCTCTG GGCCGGCTCG ACGGCCACCT GACCGGGCCC
CGACCCTGA
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| Protein sequence | MPSTTPGSSN GRRKERRKRA NGQGSIYQRG DGLWVGAAYV LMPDGTTKRR PVYGKSEEIV
RGKLTELQAN SDQGIPADAT GWTVERFLTV WLAQTVKPNR QPNTYVTYEK AVRLYLIPGL
GKKRLNRLSG ADVRQFIRRT ETTCRCCEMG RDKARPEQER RCCAVGQCCN RRPSKRQVQV
VHAVLRNALQ AAVREELIRR NVAKLVQVST PRYNVDRGLT VEQAHRLLDE AAGNRLYALL
VLALFLGMRR GELLGLQWSD IDTDRETLTI RHTLQRVGGE LRLLPPKTED SERTLSLLGL
VADALTEHRK LQQAERDAAG DRWVTTDHVF TTKIGTAIEP DNLRRFWMPL RQAAGLDGVV
FHGLRHTCVT LLLDLGVPPH IVRDIAGHSA IEVTMTIYAH ASMGEKRRAL GRLDGHLTGP
RP
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