| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1130 |
|---|
| Symbol | |
|---|
| ID | 3906609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1346663 |
|---|
| End bp | 1347994 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480238 |
|---|
| Protein GI | 86739838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.823409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.981294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCACCCAC CTGCGAAGGC GTCGACGGGG AGGCCGAAGG TGCAAGCTGG TCAGCGAAAC
GACGCACTCG CCAACCTGGC CGATCTGCTG CGGACACTGC GTGATCAGCA TCGGACCAAC
AACAGCCGGC TCGAAGCCCG CACCGGCTTC AAACGCCAGC AGATCTCTCG GGCCGTCAAC
GGCCAGGAGA TCCCGTCCGC GGACCTCGCG GACGCGCTGG ACACGGCGTT GGCCGCAGCG
GGAGCCATCC GGCGATTGCG GGACGAAGCT GTCAGGGAGA AGCGGGCCCG GGACCTGGGG
CTCGACCCGA GCAGGCAGGA GGAACCCGTG GACGCCAACC GTCGGCAGGC GTTCGAACTC
GCCGCCGCGA GCCTCGTCGC CGCCCAGATG TACCGGGAGT GGACCTCGTC CGCCCCCGAT
GTGCTGACCC TCGACGAGAT CGACGACGCG ATCAACGCGC ACACCGTCGC GTTCACCGTC
GAACCGCACC AGCGGCTCGC GCCGAAGGTG TGGAAGACGT GGAAGTCGGC GCACCACCAC
CTGATGAACG GCAGTGGCCG GGCCCGCCCG CAGACCAGGC TCACCGTCGC CGCCGGCTAC
GCCTCCTACA TGCTGTCGCG GCTGTCGTTC AACCTCGGAG ACACCCTGGC TTCGCGCCGG
TTCATCCGCC TCGCCGAAGA CCACGCGAGC CAGACCGACG ACGTGGTGCT GACCGCGTCG
GTCGGGGAGA TGGTGACGAC GCTGGCGTTC TACGGCCGCC GCTACCAGGA AGCCGCCGTC
TCGGCTCGGA AGACCGCGGT CGTGGCGGAC AACCCGTACA CCCGGGCCCG GATCGCCAGC
TACGAGGCGC GGGCCCTTGG CGCGCTCGGC GACGTCGAGG GCACCCGGGC GGCGTTGAAC
CGGATGCGCA CGTCGGTCAC GGACCTGCCG CTGCAGCCCG GGATCAGCCC GTTCGGCCCG
GCCGCCGCCG AGATGATGTA CGCCGGGGTC CTGACCCGGA TCGGCGGTGG CGTCGAGGCC
GAGCCGATAG CCCGAGCCGC GCTCGCCGCC TACGAAGGAG GCCAGGCGGG CGGGTTCGAG
GACTACGGCC ACGCGCTGCT CGCGCTCGCG GCCAGCCTCA CCGCCCGCGA ACAGCCCGAG
ATCGACGAAG CCGCGACCAT GGCCGGGAAG GTCGTCGACA TGCTCGACAC CCGGCCCACC
GCCTCGGTCT CCGACCGGGT CGCAGAGATC GCCATAGCGT TCACCGGCCA CCCCACCGTC
GAACCCGTCC GTGACTTCTG GGACCGCTGG CAGGCACGCC CCCGCCTCGA ACTGACCACG
GGCCAGGCGT GA
|
|---|
| Protein sequence | MHPPAKASTG RPKVQAGQRN DALANLADLL RTLRDQHRTN NSRLEARTGF KRQQISRAVN
GQEIPSADLA DALDTALAAA GAIRRLRDEA VREKRARDLG LDPSRQEEPV DANRRQAFEL
AAASLVAAQM YREWTSSAPD VLTLDEIDDA INAHTVAFTV EPHQRLAPKV WKTWKSAHHH
LMNGSGRARP QTRLTVAAGY ASYMLSRLSF NLGDTLASRR FIRLAEDHAS QTDDVVLTAS
VGEMVTTLAF YGRRYQEAAV SARKTAVVAD NPYTRARIAS YEARALGALG DVEGTRAALN
RMRTSVTDLP LQPGISPFGP AAAEMMYAGV LTRIGGGVEA EPIARAALAA YEGGQAGGFE
DYGHALLALA ASLTAREQPE IDEAATMAGK VVDMLDTRPT ASVSDRVAEI AIAFTGHPTV
EPVRDFWDRW QARPRLELTT GQA
|
|---|
| |