| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1107 |
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| Symbol | |
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| ID | 3905778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1321240 |
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| End bp | 1322889 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878439 |
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| Product | transposase |
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| Protein accession | YP_480216 |
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| Protein GI | 86739816 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.373309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.299253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCGGA TCAACGAGGT GGTGCTCGCG GAGAAGTTCG CGGTGCTGTT GCCGCATCTG
GATGAGCGGC AGCGCCGGCT GGTGCTGGGT GCGGACGCGC GGGCGTTCGG GCATGGCGGG
ATCCGTCTGG TGGCCCGGGC GGCCGGGGTA TCGGTGGACA CGGTCTCGCG TGGTGTCGCC
GAGCTGGGGG CGGGCGCAGC CTCGACGGGC CGGGTGCGCG CGCCGGGTGG GGGTCGTAAG
GCGTTGCGGG AGAAGGATCC GGAGCTGGTG GCGGCGCTGC TGGCGCTGGT CGAGCCCGAC
CAGCGGGGGG CTCCGGAGTC GCCGTTGCGG TGGACGGTGA AGTCCACCCG CCGGCTCGCC
GAGCAGCTCA CCGCACGTGG GCATCCGGTC GGCGCGGATA CGGTCGGTGG GCTGCTGCGG
GCGGAGGGGT TCAGCCTGCA GGGCACCTCA CGCACGACCG AGGGCGCACG TCACCCTGAC
CGGGACGACC AGTTTCGCTA TATCAACGAA CGGGTCAAGG AGTTCACCGC GGGCGGGCAG
CCGGTCGTCA GTGTGGACAC GAAGAAAAAG GAAGTCCTCG GTGACTACGC CGTCGCCGGA
CGGGAGTGGC ACCGTAAGGG GCAGCCGGTG CGGGTCCGCG CCCATGACTT TCCCGAGAAG
GGCGCGCAGA AGGCAGTGCC CTACGGGGTC TACGATCTGG CCGCCGACAC CGGCTGGGTG
TCGGTCGGCT GCGACGGGGA CACCGCCGCG TTCGCGGTCG CGACCCTGCG TCGCTGGTGG
GACGGGGAAG GCCGTCACCG CTACCCGACC GCGACCCGGC TGCTGATCAC CGCGGACGTC
GGCGGGGCCA ACGGCTACCG GGTACGTGCC TGGAAGAAGG AACTCGCCGA CCTCGCCCGC
ACGACCGGCC TGCAGATCAC CGTGTGCCAC TTCCCGCCGG GCACGTCGAA ATGGAACAAG
ATCGAGCACC GGTTGTTCTC CCGGATCAGT ACGAACTGGC GTGGCCGGCC GTTGACCAGC
CACGAGGTCG TGGTCAACAC GATCGGCGCG ACGACGACTC GCACCGGGCT GAGCGTCCAC
GCCGAACTCG ACCCCGGCTC CTACCCGACC GGGCTGACCG TGCCCGACGA GGTCATGGAC
GCCCTACCAC TGACCGCCCA CGACTGGCAC GGCCCGTGGA ACTACACCCT CGCCCCGGCG
CCACCCCGCG CCGTCTCGAC GCCGGCGTCC CGGTACGTCG AGACCGGCCA GCCCGACGAC
CGGGCCCCGG ACTGGCTACA CCATCCGACG ATCACCGGGA TGAACGGCGG CGAGTACGCC
ACCCTGCTCG CCTCCGTCGA GCAGTACATC CTCGACCACC CGCCCATCAG CCTGCACCCC
AAGCGCGCCC GTCACCGGGT CCTGCGACGC GGGCCCCTGT CGCTGTCCGA CCGGCTGCTG
GTCACCGTGA TCCACCACCG GTGGACCACC CAGCAGCAGG CCCTCACCCG TCTGCTGGGC
TCACCCCGCG GAGCCGTCGG CGACGCGATC CACGAGATGA CCCCAGTCCT GGACGGCCTC
GACCGGCGGA TCCAACCCGC GCCGATCACC GCGCCCACCG TCCAGGACCT CACCACCCTG
ATCCACAACA TCAAGAACGG ACCTTATTAA
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| Protein sequence | MERINEVVLA EKFAVLLPHL DERQRRLVLG ADARAFGHGG IRLVARAAGV SVDTVSRGVA
ELGAGAASTG RVRAPGGGRK ALREKDPELV AALLALVEPD QRGAPESPLR WTVKSTRRLA
EQLTARGHPV GADTVGGLLR AEGFSLQGTS RTTEGARHPD RDDQFRYINE RVKEFTAGGQ
PVVSVDTKKK EVLGDYAVAG REWHRKGQPV RVRAHDFPEK GAQKAVPYGV YDLAADTGWV
SVGCDGDTAA FAVATLRRWW DGEGRHRYPT ATRLLITADV GGANGYRVRA WKKELADLAR
TTGLQITVCH FPPGTSKWNK IEHRLFSRIS TNWRGRPLTS HEVVVNTIGA TTTRTGLSVH
AELDPGSYPT GLTVPDEVMD ALPLTAHDWH GPWNYTLAPA PPRAVSTPAS RYVETGQPDD
RAPDWLHHPT ITGMNGGEYA TLLASVEQYI LDHPPISLHP KRARHRVLRR GPLSLSDRLL
VTVIHHRWTT QQQALTRLLG SPRGAVGDAI HEMTPVLDGL DRRIQPAPIT APTVQDLTTL
IHNIKNGPY
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