| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1074 |
|---|
| Symbol | |
|---|
| ID | 3906417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1279455 |
|---|
| End bp | 1280705 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637878408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480185 |
|---|
| Protein GI | 86739785 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0537877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAGG ACGACGTCAT CAGCACGGGC GTGACCTGCG CGCGCCCGCA GCCCGTCGGG
GTCTTTCCGC TGCCGGCCGG CTTCCTGCTC GTGCCGGGCG GCGAGGCCAC GGCCGACCTG
CGCCGGACAC TGGCGGCCGG GAAGGTGCCG GTGGCCTGGC CGGCGGAGCT GGCCGCGCTG
GAGCTCGCCT ACCGCGGGGA GGTCGTCGCG GCCCTCGGGC AGCTGCGCGG CGACGACCCG
GTCGACCGCT ACAACCGCTT CGTGCTGCGA CCAGCGGGCG CGGACCCCGA AGACCCGGTG
GCACTGCGCC GGGCGCTCGG CGACGAGCTG GGGATCCTGG TGGACGTAGT CCGGTTCGCC
CTGGGCGAGC TGGACGAACC TCCGCCGCCC GGCGGGGAGA CCGACGAGAT CGCGGCGATG
GTGTGGTCCG CACACGCCGC CCACGCCATG GCCGCCGGCC GGACGGGCGA GGCAGCGGGG
CTGCTGGAGC GGGCCATCGC CGCGGCGCGG GAACCCTCCC CCGGTCTCGC CGCCCAGCTC
AGGTCCACCG CGGCGGACCT GCGTCGCGGA GTCGAGGGAC CGAGCCCGGC CGTCATCGCA
GAGCTGACGG CGGCGCTCGC CGCGCTGGCC GCCACCGACC TCACGGTCGG CCGGGCCGAG
TTGCACCTGA GCCTCGGTTC GGCCTACCAG GAGCTGGCCG GGGACGATCC GGCGGGCCTG
AAGGTCGCGG TGGAGCACTA CCTCTCGGCG CTGCGCCTGG TCCGCATCGA CACCGCCCCG
GAGCTGTTCG CGGCGGCACA GGTCAACCTC GCCACGGCGT ATCTGACCAT GCCGATGGCG
CAGGCGTCCG ACCAGCTGCG GGTCGGCGTG GCTGTGCAGG GCCTGCGGAC CGCTCTGTCC
GTCTACACCC GCGAGACTCA TCCCGAGCGG TGGGCCAGCA CCCAGCTCAA CCTGGCCAAC
GCCTTGGTCT ACGCGCCGTC CGCACACCGG GAGGACAACC TGCGGGAGGC GGTCGCGCGC
TACCAGGAGG TCATCGCCGC CCGCGACCGC GACGCCGACC CCCTCGGCTA CGCCCGGGCT
CGGGCGAACC AGGGCAACGC CCTGGCCCAC CTCGGCCTCT TCGACCCGGC GCAGGCGGTG
CTGCACGAGG CACGGGCGAT CTTCGAGGAG GTCGGGGACC CCGACGCCGT CCTGGCCGTG
CGCGGGGTGC TCGACGAGAT CGCCCGCCGA CTCACCGCGA AGCCGACGTG A
|
|---|
| Protein sequence | MGEDDVISTG VTCARPQPVG VFPLPAGFLL VPGGEATADL RRTLAAGKVP VAWPAELAAL
ELAYRGEVVA ALGQLRGDDP VDRYNRFVLR PAGADPEDPV ALRRALGDEL GILVDVVRFA
LGELDEPPPP GGETDEIAAM VWSAHAAHAM AAGRTGEAAG LLERAIAAAR EPSPGLAAQL
RSTAADLRRG VEGPSPAVIA ELTAALAALA ATDLTVGRAE LHLSLGSAYQ ELAGDDPAGL
KVAVEHYLSA LRLVRIDTAP ELFAAAQVNL ATAYLTMPMA QASDQLRVGV AVQGLRTALS
VYTRETHPER WASTQLNLAN ALVYAPSAHR EDNLREAVAR YQEVIAARDR DADPLGYARA
RANQGNALAH LGLFDPAQAV LHEARAIFEE VGDPDAVLAV RGVLDEIARR LTAKPT
|
|---|
| |