| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1034 |
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| Symbol | |
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| ID | 3906702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1226618 |
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| End bp | 1230583 |
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| Gene Length | 3966 bp |
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| Protein Length | 1321 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878367 |
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| Product | ABC transporter related |
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| Protein accession | YP_480145 |
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| Protein GI | 86739745 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.229722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCAGCC CACGCCCACG GCCCCAACCA GCCGAGGAGC CTGCCGCGCC CGGGCCGGAG
AAAGCCGAGG AGGCCGGGCC GGAGAAACCG GCGGCCGGCT GGCTGCGCAG GATTCTCCGC
GAGATCCTCG TGTACCGCCG CAACGCCGCC TTGGCCTTCG GCGCCGCGCT GCTCGGCACG
CTCGTCACGG CCGCCGTCCC GTTGGTCGAG CGGCAGGTCA TCGACAACGT CGTAGTCACG
CACCGCCACT CTCTCGCACC CTACGTCGCC ATTCTGCTCG GGGCCGGGGT CGTCGTCTTC
GCCGCCGCGT TCGTCCGACG CTACGTCGGT GGTCGGCTCT CCCTCGACGT CCAGTACGAC
CTGCGCGACG CCGTCTTCAG CGCCATCGAG CGCCTCGACG GGGCCCGGCA GGACCAGCTC
CAGACCGGGC AGGTGGTGAG CCGGGCGATC TCGGACGTCA CCGTGGTCCA GGGTCTGCTG
TCCTACCTGC CGATGATGAG CGGCAACCTG GTGCTCTTCG TCGTGTCCCT TGTGGTGATG
GCCTGGCTGT CCCCGCTGCT CACTGTCATC GCGCTCGCGC TGGGGCCGGC GCTGTTCATC
GTCGGCTACA GCGCCCGACG CACGGTCTTC CCGGCGACCT GGGCGGCGCA GCAGCAGGCT
GGCGAGGTTG CCGGAGCGGT CGAAGAGGCC GTCGCCGGCG TCCGGGTGGT GAAGGGGTTC
GGACAGGAGG CCCGCGAGCT GGACCGGCTG GCGGTGGACG CCCGGTGGCT GTTCGCGCTT
CGGATGCGTG CGGTGCGCAT CACCAGCAGG TTCGGTGCGG CGATGCAGGC CGTTCCCGCG
CTCGGCCAGG TCGCGGTGCT GGCGCTCGGC GGCTGGCTGG CGCTGACGGA CCGGATCACC
CTCGGTACCT TCCTCGCGTT CAGCACCTAT CTCGGCGCCC TGATCGGGCC GACGCGGACC
CTCGCCGGTC TGCTCACCGT GGGCCAGCAG GCCAAGGCCA GCACGATACG CATCTTCGAG
ATCATCGATT CGCAGCCGGC GATCACGGAC CGGCCGGACG CCGTGCGCCT TGGCCGGATC
CGCGGGCTGG TCGACCTGGA CAGTGTCACG TTCGGCTACG CTCCGTCTCG CCCCGTGCTG
CGGGACGTGA GCCTGCGGAT CGAACCGGGG GAGACGGTCG CCCTCGTCGG CACGTCCGGT
TCGGGTAAGT CGACGGTCGC GATGCTGCTG CCGCGGTTCT ACGACCCCCA GGCCGGGACG
GTCCGCCTTG ACGGTGTGGA CATCCGCACG GTGACACTGT CGTCGCTGCG GGCGCAGATC
GGGGTCGTCT TCGAGGACAG TTTCCTGTTC TCCGACACGG TGCGCGCGAA CATCGCCTAC
GGCCGGCCGG GTGCCACGGA CGACCAGATC ATCGCGGCCG CGCGGGCGGC GCAGGCGGAC
GTCTTCATCC GCGGCCTGCC CGACGGCTAT GACACCGTCG TGGGAGAACA GGGCCTGACC
CTCTCCGGCG GCCAGCGCCA GCGCGTCGCG CTCGCCCGCG CGCTACTCAC CGATCCCCGC
GTCCTGCTCC TCGACGACGC GACCTCGGCC GTGGACGCCC GGATCGAGGC CGAGATCCAT
GACACGCTTC GGACGATCAT GCGTGGCCGC ACCACTCTGC TCATCGCGCA CCGGCGCTCC
ACCCTGCGCC TTGCCGACCG GATCGCCGTG CTCGACGCCG GCCGGATCGT CGACGTCGGG
ACCGAGGCCG AACTGACGGC CCGATGTCCT CTGTTCCGCC ATCTGCTCGC CGGCCCCGGC
GAGGGCCTTC CCGACCAGCT CTCGTCCCCG TCCCCGTCTC CCGACCCCGG CCTTTCTTGC
CTGTCCAGAG GGATAAATCA GACGCAAAAG GCTCTGGATA GGCAAGGAAG TAGGCAAGGG
AAAGGAAGTA GGCAAGGGAA AAGAAAGGGA AATGTTCTCC GGGGTGGTGC TACCCGGGGT
GGTCTCGGCC GGGGGCTCGG CGGCGGGGGC CCCTTCGGTG ACATGCCGGC GACCCCCGAC
CTGCTCGCCC GGGTCGACGC CCTGCCCCCG GCGCTCGACG AGCCGCGGGT CGACCAGGCT
GCGGCGGCCG CCCCCGACCC GGCATTCTCG CTGCACCGGC TGCTGGCCGT GGTCCGCTGG
CCGCTCATCC TGGGCCTGCT GCTGGTGGCG GCAGACGCCG TCGCGGGTCT CGCCCTGCCA
GCGTTGGTGC GGCATGCCGT CGACGCCGGC GTGAGCGTCG GGGCACGTGA CGTCCTGTTC
GCCACCGCCG GTGTCGCGCT GGCGGTGGTG CTGGTCAACT GGGCGGTGCA GGTGTGGCAG
ACCCGTGTCA CGGGCCGGAT GGGGGAGCGG CTGCTCTACA TCCTGCGGGT GAAGACCTTT
GCGCAGCTGC AGCGCCTCGG GCTCGACTAC TACGAGCGCG AGCTCGCCGG CCGGATCATG
ACCCGGATGA CGACCGACGT CGACGCCCTG TCGACCTTCC TGCAGACCGG CCTGACCACC
GCCATCGTCA GCCTGCTGTC CTTCTTCGGC GTCCTGGTGG CGTTGATCGT GCTGGACGCC
GAGCTCGCCC TGGTCGTCGT CGCCGTACTG CCGATCCTGA TCGTGGTGAC GGTGGTGTTC
CGGCGTCGCT CCTCCGCCGC CTACACCGAG TCCCGGGAAC GGGTCAGCGC CGTCAACGCA
TCGCTGCAGG AGAACCTGAC CGGGCTGCGC ATCGCCCAGG CGTTCGGCCG GGAAGCGGTC
AACCAGGCGA GGTTCCGCGA GCTCGCGGAC AGCTACCGCC GCTCGCGGCT GCGGGCACAA
CGGATGATCG CTCTCTACTT CCCGTTCGTC GAGTTCCTCT CCCGGATCGC GGGTGCTCTC
GTGCTGGGAA TCGGCGCCCA CCTGGCCGTC GGCGGATCCC TGTCGCCGGG AGCACTACTC
GCGTTCCTGC TCTACGTGGA CCTCTTCTTC GCGCCGGTGC AGCAACTGTC CCAGGTGTTC
GACGGTTATC AGCAGGCCCG GGTCGGTCTG CGCCGGCTTT CCGAGCTGCT GCGGACTCCG
ACCTCGACGC CGTCGGCCGA GTACCCGCGA CCGGTCGGAC GGCTGGCCGG CGAGGTGGTC
CTGGACGGCG TCCGGTTCGC CTACGTGGGA GGCACTGCCG CGCGGACGGA GAACGCGGGG
CCGGCGGGAA ACGCGGGGCC GGCGGGAAAC GCCGTGAACG GGGTGAGCCT GCGCATCGCC
CCGGGGGAGA CAGTCGCCCT GGTCGGGGAG ACCGGCGCGG GCAAGTCCAC GGTGGTGAAG
CTGATCGCCC GGTTCTACGA CGTGACCGAG GGCGCGGTGC GGGTGGACGG TGTTGACGTG
CGCGACTTCG ACCTGCCCGC CTACCGGCGA CGGCTCGGCG TCGTTCCGCA GGAGCCGTTC
TTGTTCTCCG GCACGGTCCG GGACGCCATC GCCTACGCTC GGCCGGATGC CTCCGACGCC
GAGGTCGTGG CGGCGGCGCG GGCGGTCGGC GCCCACGCGT TCATCACCCG CCTGGCCGAC
GGCTACGATC ATCTGGTCGG CGAACGCGGC CGGGGACTGT CCGCCGGCCA GCGTCAGCTC
CTGGCGCTCG CCCGCGCGGA GCTCGCCGAC CCGGACATCC TGCTGTTCGA CGAGGCGACC
GCGGCGCTCG ACCTCGCGAC GGAGGCTGCG GTCACGGCAG CCTCGGAGGC GGTGGCCACC
CGGCGGACCA CGATCATCGT CGCCCATCGG CTCACCACGG CGGCCAGGGC CGACCGGGTG
GTCGTGATGG CGGACGGCCG GGTGGTCGAG CAGGGGCCGC ACGCCGAGCT GGTGCACGCC
GGCGGCCCGT ATTCCCGCCT GTGGGCCGCC TTCACCGCGG AGTCGGTCAC GCCCGCGGAG
TCCGTCACGC CCGTGGATCT CAGCCCGACC GCGGACAGCG GTGCTGACCG GCGAGCGGCT
GGCTGA
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| Protein sequence | MPSPRPRPQP AEEPAAPGPE KAEEAGPEKP AAGWLRRILR EILVYRRNAA LAFGAALLGT
LVTAAVPLVE RQVIDNVVVT HRHSLAPYVA ILLGAGVVVF AAAFVRRYVG GRLSLDVQYD
LRDAVFSAIE RLDGARQDQL QTGQVVSRAI SDVTVVQGLL SYLPMMSGNL VLFVVSLVVM
AWLSPLLTVI ALALGPALFI VGYSARRTVF PATWAAQQQA GEVAGAVEEA VAGVRVVKGF
GQEARELDRL AVDARWLFAL RMRAVRITSR FGAAMQAVPA LGQVAVLALG GWLALTDRIT
LGTFLAFSTY LGALIGPTRT LAGLLTVGQQ AKASTIRIFE IIDSQPAITD RPDAVRLGRI
RGLVDLDSVT FGYAPSRPVL RDVSLRIEPG ETVALVGTSG SGKSTVAMLL PRFYDPQAGT
VRLDGVDIRT VTLSSLRAQI GVVFEDSFLF SDTVRANIAY GRPGATDDQI IAAARAAQAD
VFIRGLPDGY DTVVGEQGLT LSGGQRQRVA LARALLTDPR VLLLDDATSA VDARIEAEIH
DTLRTIMRGR TTLLIAHRRS TLRLADRIAV LDAGRIVDVG TEAELTARCP LFRHLLAGPG
EGLPDQLSSP SPSPDPGLSC LSRGINQTQK ALDRQGSRQG KGSRQGKRKG NVLRGGATRG
GLGRGLGGGG PFGDMPATPD LLARVDALPP ALDEPRVDQA AAAAPDPAFS LHRLLAVVRW
PLILGLLLVA ADAVAGLALP ALVRHAVDAG VSVGARDVLF ATAGVALAVV LVNWAVQVWQ
TRVTGRMGER LLYILRVKTF AQLQRLGLDY YERELAGRIM TRMTTDVDAL STFLQTGLTT
AIVSLLSFFG VLVALIVLDA ELALVVVAVL PILIVVTVVF RRRSSAAYTE SRERVSAVNA
SLQENLTGLR IAQAFGREAV NQARFRELAD SYRRSRLRAQ RMIALYFPFV EFLSRIAGAL
VLGIGAHLAV GGSLSPGALL AFLLYVDLFF APVQQLSQVF DGYQQARVGL RRLSELLRTP
TSTPSAEYPR PVGRLAGEVV LDGVRFAYVG GTAARTENAG PAGNAGPAGN AVNGVSLRIA
PGETVALVGE TGAGKSTVVK LIARFYDVTE GAVRVDGVDV RDFDLPAYRR RLGVVPQEPF
LFSGTVRDAI AYARPDASDA EVVAAARAVG AHAFITRLAD GYDHLVGERG RGLSAGQRQL
LALARAELAD PDILLFDEAT AALDLATEAA VTAASEAVAT RRTTIIVAHR LTTAARADRV
VVMADGRVVE QGPHAELVHA GGPYSRLWAA FTAESVTPAE SVTPVDLSPT ADSGADRRAA
G
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