Gene Francci3_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1007 
Symbol 
ID3906694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1200195 
End bp1201013 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID637878340 
Productgas vesicle synthesis GvpLGvpF 
Protein accessionYP_480119 
Protein GI86739719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA TCATTTATGG CATCACGCGG TCCGGGCATC CGGCGCCGAT GCCACCGCCG 
CCCGGCATCG GACACCCTCC GGGGCAGGTG CACCTGGTGC GGTTCGGGCC GTTGGCGGCG
GCGGTCAGCG TCACCGCGGA TGTCGGGATT CTGGGCGAGT CCGAGGCCGT GCGTCATCTG
GATATCCTGC AGCGACTTCT CGCCGGAGGC CCCGTGCTGC CGCTGCGGTT CGGGACCGTC
GCCCCCGACG AGGCTGCCGT ATGCCGTGAG GTCCTCGCCC CGCTCGCCGA CGAGATGCCC
GATCGGCTCG ATGCGCTCGA AGGGCTGGTG GAGCTGCATC TCGACGTGGA GGAGGACGAG
CGGTCCGCCC TCACCGAGGT ACTGCCGGGC AGCCCGTTCG TCGGGGTCAC GCCGTCCGCG
GATCTCGACG CGCGGATCAG GCTGGGCCAG CAGGTGGCCG ACCTGGTCAT CGCCCGCCGG
CAGCGCCAGG CCGATGCGAT CCTCGACCTG CTGCGTCCGC TGGCGCTGTC CGACCGGCCA
CGGCGCCCGC ACGGCGGCGC GGATGACCCG GTGCTCAGCT GGGCGTTTCT GCTGCGCGAT
GCCGCCGTGG ATGCGTTCGA CGCCGCCGTC GCCGATCTCC GTCGCGCCTG TCCGTACTTC
ACGATCGAAT ACGTCGGCCC ACTTCCCGCC ATCGACTTCG CCGAGGACCC CACGGGTCCG
CCCGGAGCCG GTGACACGGC GGACGCCGAC GCCTTCGGGG GGACCGGCAG ATGGGGTTGG
AGCTCGGACT CCGACATCTG GGAAGGGAAT GATCAATGA
 
Protein sequence
MSVIIYGITR SGHPAPMPPP PGIGHPPGQV HLVRFGPLAA AVSVTADVGI LGESEAVRHL 
DILQRLLAGG PVLPLRFGTV APDEAAVCRE VLAPLADEMP DRLDALEGLV ELHLDVEEDE
RSALTEVLPG SPFVGVTPSA DLDARIRLGQ QVADLVIARR QRQADAILDL LRPLALSDRP
RRPHGGADDP VLSWAFLLRD AAVDAFDAAV ADLRRACPYF TIEYVGPLPA IDFAEDPTGP
PGAGDTADAD AFGGTGRWGW SSDSDIWEGN DQ