| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0965 |
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| Symbol | |
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| ID | 3903872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1141010 |
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| End bp | 1142944 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878299 |
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| Product | cell wall biosynthesis glycosyltransferase-like protein |
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| Protein accession | YP_480078 |
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| Protein GI | 86739678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCCG ATTCTGATTC CGAAGTCCCG CGTGCGCGGG CGCTCCCCCG CGGCGCGCGT
CGGCATGCCC ATGCGCACCG AGATCCCCGC GTGCCCCGAC GCTCACCTCG GCTGTGGATG
GTAGCGGCCG CGGGGTGGTG GGCCGCGGGG TGGGGGGCCG CCCTGCACAC CACGTCGGCC
CTCGTGTTGT CCGCGTTGGT CGGTCTGGAC GGGAGCATGT CTTACCTCTT GCCCGGCGCA
CTCGCGGTCG TCCTGCCTCG GATGTTCGGC CGGGGTGGCC GGGGCCGGCG GATCCCGTGG
CTCGCCCGGC TCGCGTGCGA GTCGGGCGGC TGGTACGTCT ACATGTTCGC CGGTTCGCCG
GACATCAGGC TGGTCTCGTA CGGCGGTCCG CGCCTGGGCC AGCCGTTCGC CGTGGTACTG
GGCGCGGTGG CGGCGGTGAC CGGCGGCCTG GTCCTGTCCG GTCGGCTCCG GGCGCGGACC
CGCGGGTCGA TCCCCGGCGC CAGCCGCCGG CGGCGCTGGG TGTGGGCGCT GGTCAGCGTG
CCCCTCGCGG TGACGCTGGG GGTGCGTGCG GCCGAGCATC ACCACGTCGT GCTACTCGCC
GCATGGACGA TCGTCTCGTT GCTGATGCTG CTGGTCGCCA GCCTGACCCT CGTGCGCGGC
CAGTACAGCT GGCAGCGTCC CGAGCGGGTG CATCACGTGG ACCTGACCGG CAACCTCGCG
CCCCGCAACC GCTTCTCCCT CATCGTCCCC GCCCGCGACG AGCCGGTGCT CGGGCGGACC
CTGACCCAGA TCCTTGCCGG CGACTACCCC GGCGACCTGG TGGAACTGGT CGTGATGGTG
TCGTATGACG AGGTCGACCA GGAGACCCGA CGGGTCGCCG AGGAGATCGC CGGCCGGCAT
TCCAACGTGC GGGTCGTCGC GCCCGAAGGC AGCCGGCGTA GTAAACCCCT GTCCCTGGAG
GACGCCCGCC GGCACTGCAC CGGCGACCTG GTCGGCGTCG TCGACGCGGA GTCCCTGCTC
GCCGGGGGAC TCCTGCGTTA CGTGAACACG CTGGCCCTGC GCCACGCCGA CGTCGGCATC
TTTCAGGGCG GCGTGCAGCT CATGAACGCG CGTGCCACGG CGTGGCGGCG CGCCGCGGAC
CACTCACCGA TACGGGCGTT CCTCCACTGG TTGGACGCGG GCACCTCCTG GTGGCGGGCC
CGCAACTGCC TCGAATACTA CATCTGGTTC ATGTCGCGGC TGCGTTTCCA GGCGCGCGCG
CGTTTCATCC CACTCGGCGG CAACACGGTG TTCATTCGGC GAACGGTGCT GGAAAGGCTC
GGTGGGTGGG ACGTCTCCTG CCTCACCGAG GACTGTGACC TCGGGGTGCG GGCTTCGGCC
GCCGGAATCC CGACCGCGGT CTTCTACCAT CCGGATCTGA CGACCCGGGA GGAGACCCCG
GAAAGCCTCA CGAAACTCAT CATCCAGCGC ACCCGCTGGA TGATGGGGTT CATGCAGGTC
CTCTTCAAGG GGGACTGGCG GGCGCTGCCG GGAGCACGTC AGCGCATCAT GGCGGTGGAG
ATGCTCACGA TGCCGTTCTT CCAGGCACTC GCCGGCGTCC TGCTGCCGGT GTCGCTGGTC
CTCACGTTGT TTCTGGCGGC GCCGACCGGT CTGGTCATCG TCTTCTGGCT TCCGTTCGGT
GCGACCGTCA TGACGGTTTT CTCCGAGCAG GCGGCGTTCC GCGAGTTCGC CGAGGCGTAC
GGGCTCGATC TGCGTCGCTG GGACAGCGTG CGGCTCGTGC TCTGCGCCCC GCTGTACCAG
CTCGCGCTCT CCGCCGCCGC GGTGCGCGCC ACGGCCCGGT TGCTGCGTGG CCGGGTCGAG
TGGGAGAAGA CCTCCCACTC CGGGGCCCAC CACAGCACCG GCTCCGGCCG CTTCGAGCTG
GAGGCGGCGT CGTGA
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| Protein sequence | MTSDSDSEVP RARALPRGAR RHAHAHRDPR VPRRSPRLWM VAAAGWWAAG WGAALHTTSA
LVLSALVGLD GSMSYLLPGA LAVVLPRMFG RGGRGRRIPW LARLACESGG WYVYMFAGSP
DIRLVSYGGP RLGQPFAVVL GAVAAVTGGL VLSGRLRART RGSIPGASRR RRWVWALVSV
PLAVTLGVRA AEHHHVVLLA AWTIVSLLML LVASLTLVRG QYSWQRPERV HHVDLTGNLA
PRNRFSLIVP ARDEPVLGRT LTQILAGDYP GDLVELVVMV SYDEVDQETR RVAEEIAGRH
SNVRVVAPEG SRRSKPLSLE DARRHCTGDL VGVVDAESLL AGGLLRYVNT LALRHADVGI
FQGGVQLMNA RATAWRRAAD HSPIRAFLHW LDAGTSWWRA RNCLEYYIWF MSRLRFQARA
RFIPLGGNTV FIRRTVLERL GGWDVSCLTE DCDLGVRASA AGIPTAVFYH PDLTTREETP
ESLTKLIIQR TRWMMGFMQV LFKGDWRALP GARQRIMAVE MLTMPFFQAL AGVLLPVSLV
LTLFLAAPTG LVIVFWLPFG ATVMTVFSEQ AAFREFAEAY GLDLRRWDSV RLVLCAPLYQ
LALSAAAVRA TARLLRGRVE WEKTSHSGAH HSTGSGRFEL EAAS
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