| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0938 |
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| Symbol | |
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| ID | 3902908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1102552 |
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| End bp | 1104339 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878272 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_480051 |
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| Protein GI | 86739651 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00411841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.908691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA CCAGACACGG AACCCCGACC GCCCGACTCG ACCAGGTCGG CCGCGCCGAG
GCACTGCGCC GGATGGGAGC GGATCCGGTG GATGTGGCCG TGATCGGCGG CGGGGTCACC
GGTACGGGGG TGGCGCTGGA CGCGGTGACC CGGGGCCTGT CCGTCGCCCT GGTCGAGGCG
CGCGACCTCG CCGCCGGCAC GTCCAGCCGG TCGAGCAAGC TCATCCACGG CGGGCTGCGG
TATCTCGAGC AGCTCAACGC CCCGCTGGTC CGGGAGGCGC TGCGGGAGCG GTCCCTCATG
CTGGACACGC TCGCGCCCCA TCTGGTCCGG GCCATCCCGT TCCTGCTGCC GTTGACCCGC
CACGGTTGGG AACGTGCCTA CATCGGCAGT GGTGTGCTGC TCTACGACAC CCTCGGGCAG
GGGCTGGCCC GCGTCGGGCC GGGCGGCGAC GCCACCATGC CCCATCACCG GCACCTGACC
CGCAAGGCGG CGCTGCGGGA GTTCCCGTCG CTGCGCCCGG ACGCCCTCGT CGGCGCGATC
CAGTACTGGG ACGGCCAGGT CGACGACGCG CGGCACACCG TGTTCGTCGC GCGGACCGCT
GCTCGCTACG GGGCGCTCAT CGCGACCAGC GCGCGGGTCA CCGGCTTCCT GCGGGAGGGC
GACCGGGTCG CCGGCGTGCG GGTGCGTGAC CTCGAGTCGG GCGCCGAGAT CGAGCTGCGG
GCCCGCCAGA CGATCAACGC CGCCGGGGTG TGGACCGACG AGATCCAGGC GATGGTAGGC
GGGCGTGGCC AGCTGTCGGT CCGAGCCTCC AAGGGAGTGC ACATCGTCGT GCCCCGCGAC
CGCATCCATG GCGTCACCGG CCTGATCCTG CGCACCGAGA AGAGCGTGCT GTTCGTCATC
CCGTGGGGCA GCCACTGGAT CATCGGCACC ACCGACACCG ACTGGAGCCT CGACCTCGCC
CATCCGGCGG CCAGCAGCGC CGACATCGAC TACCTGCTCG ACACGGTCAA CCGGGTGCTG
CGCACGCCGC TCACGGCGGC GGACATCACC GGGGTGTACG CCGGGCTGCG CCCGCTGCTC
GCCGGGGAGT CCGAGGACAC CTCGCGGCTG TCCCGCGAGC ATGCCGTGGT CAGCCCCGTC
TCCGGGCTGA CGATGGTCGC CGGCGGGAAG TACACGACCT ACCGGGTGAT GGCCGCCGAC
GCCGTCGACG CGGCCGTGCA CGGCATGAAC CGGGCGGTGC CGCCGTCGTG CACCGAGAAG
ATCCCGCTGC TCGGCGCGGA CGGGTTCCCC GCGCTGTGGA ACGCCCGGGA GACCCTCGCC
CGCCGCGCGG GGCTGCACGT CGGCTGGATC GAGCACCTCC TGCACCGCTA CGGCACCCTC
ACCGAGGAGC TTCTGGACCT CATCGAGACG CGACCGGATC TCGCCCAGCC GCTGCGCGGG
GCATCGACCT ACCTGGCCGC GGAGGCGGTG TACGCGGCCT CCCACGAGGG GGCGCTGCAC
CTGGAGGACG TGCTCACCCG GCGGACCCGC GTCTCGATCG AGACCATCGA CCGGGGGGTG
GAGGCCGCCG AGCACGTGGC CGATCTCATC GCCCCCGTGC TCGGCTGGGA CCAGGTGACC
CGCGCCCGCG AGGTCGCGCA CTACCTCGCC CGGGTGGAGG CCGAACGGGC CTCGCAGCGG
CAAGCCGACG ACGCGACCGC CGACGCGGCC CGGCTCGGCG CGCCCGACGT GCGCCGGCTG
GGCCGGACGG ACCACCGCGC CCCGGCGGCG ACCGGCGGAC CGTCCTGA
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| Protein sequence | MTPTRHGTPT ARLDQVGRAE ALRRMGADPV DVAVIGGGVT GTGVALDAVT RGLSVALVEA
RDLAAGTSSR SSKLIHGGLR YLEQLNAPLV REALRERSLM LDTLAPHLVR AIPFLLPLTR
HGWERAYIGS GVLLYDTLGQ GLARVGPGGD ATMPHHRHLT RKAALREFPS LRPDALVGAI
QYWDGQVDDA RHTVFVARTA ARYGALIATS ARVTGFLREG DRVAGVRVRD LESGAEIELR
ARQTINAAGV WTDEIQAMVG GRGQLSVRAS KGVHIVVPRD RIHGVTGLIL RTEKSVLFVI
PWGSHWIIGT TDTDWSLDLA HPAASSADID YLLDTVNRVL RTPLTAADIT GVYAGLRPLL
AGESEDTSRL SREHAVVSPV SGLTMVAGGK YTTYRVMAAD AVDAAVHGMN RAVPPSCTEK
IPLLGADGFP ALWNARETLA RRAGLHVGWI EHLLHRYGTL TEELLDLIET RPDLAQPLRG
ASTYLAAEAV YAASHEGALH LEDVLTRRTR VSIETIDRGV EAAEHVADLI APVLGWDQVT
RAREVAHYLA RVEAERASQR QADDATADAA RLGAPDVRRL GRTDHRAPAA TGGPS
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