Gene Francci3_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0935 
Symbol 
ID3906099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1098769 
End bp1099605 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID637878269 
Producthypothetical protein 
Protein accessionYP_480048 
Protein GI86739648 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0237848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGCGG CCAGCGCACT TCATCTCAGC AGTCCCGCTT CGGACCCGGA CTCCTCGCAT 
GACCTGTCGG TGTCCGTACC GTCCGGGCCG AGAGGCGCAG CCCGGCTCGG ACGCACATCC
GGGCTCGGTC CCACCTCCGA AGCACGCCCG TCGGGCGTGG GTGGGCCGGT GAGGACGAGC
CGGGTGGCCG GTACCGGCGC GGACGGCAGG GCGGGGCCCG CCTCCGACCT CACCGCGATC
CCCGGGGTCG GACCGGTGAT GATGACGAAG ATTCCGCAGG CCGCCCGGCA GGTGATCGTG
GTGAGCGGCA TCGACCGGAA TGCGAACACC AACAACGTGA CGCTGTGGGA ACGGGCCGAT
CCCGGCTCCG CCTGGAAGAC CTACGGCGCC CCGCTGATCG GCCGCAACGG CGCCGATGGC
TGGACGTACG ACCATCGGGA GGGCGATCTG CGCAGCCCGA TCGGCGTGTT CAGTCTCACC
GCCGCCGGTG GCAAGCTCGC CGATCCGGGC ACCGGTCTGC CCTACGAGTA TCGCCCGTCG
TTCTACCGGG CGACGGGTCC GCGGGGCGAG CCGATGCCCG ATGCGTTCAA CTATGTGGTC
GCCATCGACT ACAACCGACT GCCCGGGTAT CCGCCGTCGG ACCCGACCCG TCCGCTGGGC
CCGCAGATCG GCGGGGACAT CTGGCTGCAT GTCGACCACA GATCGCCGAC GCGGGGCTGC
ATCGCGGTGG AACAGGACGC CCTCGTGGCC ATTCTCCGTT GGCTGACCCC GATGGCCCAT
CCCATGATCG TTATGGGAGA CGTGGCGGAT CTCGGCGCCG ACAACGTGCG CCCCTGA
 
Protein sequence
MGAASALHLS SPASDPDSSH DLSVSVPSGP RGAARLGRTS GLGPTSEARP SGVGGPVRTS 
RVAGTGADGR AGPASDLTAI PGVGPVMMTK IPQAARQVIV VSGIDRNANT NNVTLWERAD
PGSAWKTYGA PLIGRNGADG WTYDHREGDL RSPIGVFSLT AAGGKLADPG TGLPYEYRPS
FYRATGPRGE PMPDAFNYVV AIDYNRLPGY PPSDPTRPLG PQIGGDIWLH VDHRSPTRGC
IAVEQDALVA ILRWLTPMAH PMIVMGDVAD LGADNVRP